RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 GANQ9H2C0 597 aa17.06■□□□□ 0.32
TVP23C-203ENST00000428082 FBXL5Q9UKA1 691 aa17.06■□□□□ 0.32
TVP23C-203ENST00000428082 ZNF862O60290 1169 aa17.05■□□□□ 0.32
TVP23C-203ENST00000428082 EPB41P11171 864 aaKnown RBP17.05■□□□□ 0.32
TVP23C-203ENST00000428082 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
TVP23C-203ENST00000428082 AFG1LQ8WV93 481 aa17.05■□□□□ 0.32
TVP23C-203ENST00000428082 DRC1Q96MC2 740 aa17.05■□□□□ 0.32
TVP23C-203ENST00000428082 REEP2Q9BRK0 252 aa17.05■□□□□ 0.32
TVP23C-203ENST00000428082 ZNF302Q9NR11 478 aa17.05■□□□□ 0.32
TVP23C-203ENST00000428082 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
TVP23C-203ENST00000428082 FAN1Q9Y2M0 1017 aa17.05■□□□□ 0.32
TVP23C-203ENST00000428082 IGSF9BQ9UPX0 1349 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 CLSTN1O94985 981 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 HMGCRP04035 888 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 IVLP07476 585 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 PRKAR2AP13861 404 aaKnown RBP17.04■□□□□ 0.32
TVP23C-203ENST00000428082 PRMT2P55345 433 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 KLHDC7AQ5VTJ3 777 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 SFR1Q86XK3 245 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 FMNL3Q8IVF7 1028 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 C4orf19Q8IY42 314 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 PPTC7Q8NI37 304 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 PXYLP1Q8TE99 480 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 SELENOOQ9BVL4 669 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 BHMT2Q9H2M3 363 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 OLFML3Q9NRN5 406 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 PTCH2Q9Y6C5 1203 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 LOXHD1Q8IVV2 1947 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 GTPBP10A4D1E9 387 aaKnown RBP17.04■□□□□ 0.32
TVP23C-203ENST00000428082 TMEM150BA6NC51 233 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 CES2O00748 559 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 EIF3DO15371 548 aaKnown RBP eCLIP17.04■□□□□ 0.32
TVP23C-203ENST00000428082 DYNC1LI2O43237 492 aaPredicted RBP17.04■□□□□ 0.32
TVP23C-203ENST00000428082 LYPLA2O95372 231 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 AKR1A1P14550 325 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 CNGA1P29973 690 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 ACTN2P35609 894 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
TVP23C-203ENST00000428082 NFRKBQ6P4R8 1299 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 EMBQ6PCB8 327 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 STXBP4Q6ZWJ1 553 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 TLK2Q86UE8 772 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 VPS36Q86VN1 386 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 AENQ8WTP8 325 aaKnown RBP17.04■□□□□ 0.32
TVP23C-203ENST00000428082 ATP6V0A1Q93050 837 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 SPAG5Q96R06 1193 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.04■□□□□ 0.32
TVP23C-203ENST00000428082 TLR10Q9BXR5 811 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 PCDHGC5Q9Y5F6 944 aa17.04■□□□□ 0.32
TVP23C-203ENST00000428082 MAFBQ9Y5Q3 323 aaPredicted RBP17.04■□□□□ 0.32
TVP23C-203ENST00000428082 UBE4BO95155 1302 aa17.03■□□□□ 0.32
TVP23C-203ENST00000428082 ATP4AP20648 1035 aa17.03■□□□□ 0.32
TVP23C-203ENST00000428082 CCND3P30281 292 aaPredicted RBP17.03■□□□□ 0.32
TVP23C-203ENST00000428082 YWHABP31946 246 aaKnown RBP17.03■□□□□ 0.32
TVP23C-203ENST00000428082 EPHB4P54760 987 aa17.03■□□□□ 0.32
TVP23C-203ENST00000428082 IRX5P78411 483 aaPredicted RBP17.03■□□□□ 0.32
TVP23C-203ENST00000428082 NFIL3Q16649 462 aa17.03■□□□□ 0.32
TVP23C-203ENST00000428082 EXOC3L4Q17RC7 722 aa17.03■□□□□ 0.32
TVP23C-203ENST00000428082 TRIM50Q86XT4 487 aa17.03■□□□□ 0.32
TVP23C-203ENST00000428082 DAAM1Q9Y4D1 1078 aa17.03■□□□□ 0.32
TVP23C-203ENST00000428082 LGR5O75473 907 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 RPS6KA5O75582 802 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 STBD1O95210 358 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 STAT5BP51692 787 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 HNRNPH2P55795 449 aaKnown RBP17.02■□□□□ 0.32
TVP23C-203ENST00000428082 PRKCEQ02156 737 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 NNTQ13423 1086 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 ZSCAN26Q16670 478 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 MAP3K21Q5TCX8 1036 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 C8orf74Q6P047 294 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 GBP6Q6ZN66 633 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 AFAP1L1Q8TED9 768 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 SH2D3AQ9BRG2 576 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 KCND2Q9NZV8 630 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 STIM2Q9P246 746 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 SEL1LQ9UBV2 794 aa17.02■□□□□ 0.32
TVP23C-203ENST00000428082 N4BP1O75113 896 aaKnown RBP17.02■□□□□ 0.31
TVP23C-203ENST00000428082 NR3C1P04150 777 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 MMP3P08254 477 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 FAM160B1Q5W0V3 765 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 ANO5Q75V66 913 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 IFT20Q8IY31 132 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 SLAIN1Q8ND83 568 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 LRRC1Q9BTT6 524 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 AZI2Q9H6S1 392 aa17.02■□□□□ 0.31
TVP23C-203ENST00000428082 EMSYQ7Z589 1322 aa17.01■□□□□ 0.31
TVP23C-203ENST00000428082 ARID2Q68CP9 1835 aa17.01■□□□□ 0.31
TVP23C-203ENST00000428082 SEPT4O43236 478 aa17.01■□□□□ 0.31
TVP23C-203ENST00000428082 BUB1O43683 1085 aa17.01■□□□□ 0.31
TVP23C-203ENST00000428082 DKC1O60832 514 aaKnown RBP eCLIP17.01■□□□□ 0.31
TVP23C-203ENST00000428082 RNF40O75150 1001 aa17.01■□□□□ 0.31
TVP23C-203ENST00000428082 PALMO75781 387 aa17.01■□□□□ 0.31
TVP23C-203ENST00000428082 GFPT2O94808 682 aa17.01■□□□□ 0.31
TVP23C-203ENST00000428082 FAM13AO94988 1023 aa17.01■□□□□ 0.31
TVP23C-203ENST00000428082 HSPA8P11142 646 aaKnown RBP17.01■□□□□ 0.31
TVP23C-203ENST00000428082 CAPN2P17655 700 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms