RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 EPHA7Q15375 998 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 LRRC55Q6ZSA7 311 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 DDX53Q86TM3 631 aaKnown RBP6.58□□□□□ -1.36
LINC00458-202ENST00000427299 CMTM4Q8IZR5 234 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 SYNE4Q8N205 404 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 PITHD1Q9GZP4 211 aaPredicted RBP6.58□□□□□ -1.36
LINC00458-202ENST00000427299 SAMD15Q9P1V8 674 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 HS3ST4Q9Y661 456 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 RALGAPBQ86X10 1494 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 GRID2IPA4D2P6 1211 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 ITGB1P05556 798 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 KIR2DL3P43628 341 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 TCEA2Q15560 299 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 DCAF17Q5H9S7 520 aaPredicted RBP6.57□□□□□ -1.36
LINC00458-202ENST00000427299 KANSL1Q7Z3B3 1105 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 NME9Q86XW9 330 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 ST8SIA2Q92186 375 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 ARL8AQ96BM9 186 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 TUBGCP5Q96RT8 1024 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 FEZ1Q99689 392 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 PCIF1Q9H4Z3 704 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 PACSIN3Q9UKS6 424 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC00458-202ENST00000427299 SYNJ2O15056 1496 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 UNC13BO14795 1591 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 MAST1Q9Y2H9 1570 aa6.57□□□□□ -1.36
LINC00458-202ENST00000427299 ROCK2O75116 1388 aaKnown RBP6.57□□□□□ -1.36
LINC00458-202ENST00000427299 B4E1Z4 1266 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 PPP1R12AO14974 1030 aaPredicted RBP6.56□□□□□ -1.36
LINC00458-202ENST00000427299 DAPK3O43293 454 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 RFPL3O75679 317 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 STC2O76061 302 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 ASMTLO95671 621 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 PTX3P26022 381 aaPredicted RBP6.56□□□□□ -1.36
LINC00458-202ENST00000427299 NPEPPSP55786 919 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 LY6G5CQ5SRR4 150 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 APBB1IPQ7Z5R6 666 aaPredicted RBP6.56□□□□□ -1.36
LINC00458-202ENST00000427299 KIAA1958Q8N8K9 716 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 PROKR1Q8TCW9 393 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 RPGRQ92834 1020 aaKnown RBP6.56□□□□□ -1.36
LINC00458-202ENST00000427299 ANP32EQ9BTT0 268 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 PLXNC1O60486 1568 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 ABCA8O94911 1581 aa6.56□□□□□ -1.36
LINC00458-202ENST00000427299 A0A0A6YYJ9 748 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 PTPDC1A2A3K4 754 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 CLSTN1O94985 981 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 ABHD16AO95870 558 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 GNAT2P19087 354 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 NCLP19338 710 aaKnown RBP6.55□□□□□ -1.36
LINC00458-202ENST00000427299 ZFP36P26651 326 aaKnown RBP6.55□□□□□ -1.36
LINC00458-202ENST00000427299 GYS2P54840 703 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 DALRD3Q5D0E6 543 aaKnown RBP6.55□□□□□ -1.36
LINC00458-202ENST00000427299 CXorf67Q86X51 503 aaPredicted RBP6.55□□□□□ -1.36
LINC00458-202ENST00000427299 PRIMA1Q86XR5 153 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 NCDNQ9UBB6 729 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 ABCC5O15440 1437 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 KIAA1107Q9UPP5 1409 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 CCDC7Q96M83 1385 aa6.55□□□□□ -1.36
LINC00458-202ENST00000427299 TRPM1Q7Z4N2 1603 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 RNF17Q9BXT8 1623 aaKnown RBP6.54□□□□□ -1.36
LINC00458-202ENST00000427299 PZPP20742 1482 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 ARID4BQ4LE39 1312 aaPredicted RBP6.54□□□□□ -1.36
LINC00458-202ENST00000427299 A0A0A6YYK5 440 aaPredicted RBP6.54□□□□□ -1.36
LINC00458-202ENST00000427299 H7C1D1 291 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 PLD2O14939 933 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 PPFIA4O75335 1185 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 NUDT3O95989 172 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 IGFALSP35858 605 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 PTPAQ15257 358 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 CCDC142Q17RM4 750 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 FNDC3BQ53EP0 1204 aaKnown RBP6.54□□□□□ -1.36
LINC00458-202ENST00000427299 ESRP1Q6NXG1 681 aaKnown RBP6.54□□□□□ -1.36
LINC00458-202ENST00000427299 SOX7Q9BT81 388 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 OSBPL6Q9BZF3 934 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 MTG2Q9H4K7 406 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 SORCS3Q9UPU3 1222 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 CD2APQ9Y5K6 639 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 KTN1Q86UP2 1357 aaKnown RBP6.54□□□□□ -1.36
LINC00458-202ENST00000427299 ANKRD30BQ9BXX2 1392 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 ANKRD30AQ9BXX3 1397 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 IQGAP3Q86VI3 1631 aa6.54□□□□□ -1.36
LINC00458-202ENST00000427299 CDC42BPBQ9Y5S2 1711 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 ZBED9Q6R2W3 1325 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 ANKRD62A6NC57 917 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 TRIM24O15164 1050 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 RAPGEF3O95398 923 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 HK1P19367 917 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 IL12RB1P42701 662 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 ZNF174Q15697 407 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 FAM214AQ32MH5 1076 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 KCNV1Q6PIU1 500 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 CPT1CQ8TCG5 803 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 NTN5Q8WTR8 489 aaPredicted RBP6.53□□□□□ -1.36
LINC00458-202ENST00000427299 CLUHP3Q96NS8 147 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 ENKD1Q9H0I2 346 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 TMX1Q9H3N1 280 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 SYNPO2Q9UMS6 1093 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 PRKAB1Q9Y478 270 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 ZMYM4Q5VZL5 1548 aa6.53□□□□□ -1.36
LINC00458-202ENST00000427299 SHROOM2Q13796 1616 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms