RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZBTB45Q96K62 511 aaPredicted RBP33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 NUP62CLQ9H1M0 184 aa33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 COLQQ9Y215 455 aaPredicted RBP33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 GDAQ9Y2T3 454 aa33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 SCP2P22307 547 aa33.56■■■□□ 2.96
CSNK1E-206ENST00000413574 SARSP49591 514 aaKnown RBP33.56■■■□□ 2.96
CSNK1E-206ENST00000413574 PSMD2Q13200 908 aa33.56■■■□□ 2.96
CSNK1E-206ENST00000413574 TDHQ8IZJ6 230 aa33.56■■■□□ 2.96
CSNK1E-206ENST00000413574 SCFD1Q8WVM8 642 aa33.56■■■□□ 2.96
CSNK1E-206ENST00000413574 GSDMAQ96QA5 445 aa33.56■■■□□ 2.96
CSNK1E-206ENST00000413574 MTIF3Q9H2K0 278 aaKnown RBP33.56■■■□□ 2.96
CSNK1E-206ENST00000413574 TISP43B9A030 160 aa33.55■■■□□ 2.96
CSNK1E-206ENST00000413574 UPP2O95045 317 aa33.55■■■□□ 2.96
CSNK1E-206ENST00000413574 HOXD13P35453 343 aa33.55■■■□□ 2.96
CSNK1E-206ENST00000413574 HVCN1Q96D96 273 aa33.55■■■□□ 2.96
CSNK1E-206ENST00000413574 C1orf112Q9NSG2 853 aa33.55■■■□□ 2.96
CSNK1E-206ENST00000413574 FAM105AQ9NUU6 356 aa33.55■■■□□ 2.96
CSNK1E-206ENST00000413574 HNRNPDLO14979 420 aaKnown RBP33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 NPTXRO95502 500 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 AMHP03971 560 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 ALCAMQ13740 583 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 FAM117BQ6P1L5 589 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 SLC27A1Q6PCB7 646 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 SMYD4Q8IYR2 804 aaPredicted RBP33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 ACCSQ96QU6 501 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 PTPRHQ9HD43 1115 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 MAN1B1Q9UKM7 699 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 TNFSF13BQ9Y275 285 aa33.54■■■□□ 2.96
CSNK1E-206ENST00000413574 A0A0U1RQF3 1178 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 ANKRD63C9JTQ0 380 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 N4BP3O15049 544 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 ABCD1P33897 745 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 FAM189BP81408 668 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 FAM109BQ6ICB4 259 aaPredicted RBP33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 SLC39A4Q6P5W5 647 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 ZBTB33Q86T24 672 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 NELFCDQ8IXH7 590 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 ZNF507Q8TCN5 953 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 CCDC51Q96ER9 411 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 RMND1Q9NWS8 449 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 ANKFY1Q9P2R3 1169 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 MAPK8IP1Q9UQF2 711 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 PCDHB2Q9Y5E7 798 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 BIN1O00499 593 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 LIG4P49917 911 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 ZPBP2Q6X784 338 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 STXBP4Q6ZWJ1 553 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 ECHDC2Q86YB7 292 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 RNF169Q8NCN4 708 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 TRAIPQ9BWF2 469 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 HAPLN2Q9GZV7 340 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 KIAA1468Q9P260 1216 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 HES2Q9Y543 173 aa33.53■■■□□ 2.96
CSNK1E-206ENST00000413574 GBF1Q92538 1859 aa33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 ABLIM1O14639 778 aa33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 EIF3DO15371 548 aaKnown RBP eCLIP33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 ATF7P17544 494 aaPredicted RBP33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 PROZP22891 400 aa33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 CRIPAKQ8N1N5 446 aa33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 TOP1MTQ969P6 601 aa33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 TCHPQ9BT92 498 aa33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 ZMYM2Q9UBW7 1377 aa33.52■■■□□ 2.96
CSNK1E-206ENST00000413574 GRXCR1A8MXD5 290 aa33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 PIGRP01833 764 aa33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 ATP2A2P16615 1042 aaKnown RBP33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 ZNF568Q3ZCX4 644 aa33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 FAM43BQ6ZT52 329 aaPredicted RBP33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 SYCP3Q8IZU3 236 aa33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 SMG8Q8ND04 991 aaKnown RBP33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 LPPQ93052 612 aa33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 TRIM6Q9C030 488 aaPredicted RBP33.51■■■□□ 2.96
CSNK1E-206ENST00000413574 MEIS3P2A8K0S8 358 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 TOM1L1O75674 476 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 HARSP12081 509 aaKnown RBP33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 CDT1Q9H211 546 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 NXF3Q9H4D5 531 aaKnown RBP33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 IPPQ9Y573 584 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 MPZL3Q6UWV2 235 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 SLC9A7Q96T83 725 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 ADPGKQ9BRR6 497 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 EXOC7Q9UPT5 735 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 PCDHB7Q9Y5E2 793 aa33.5■■■□□ 2.95
CSNK1E-206ENST00000413574 MATR3P43243 847 aaKnown RBP eCLIP33.49■■■□□ 2.95
CSNK1E-206ENST00000413574 ZNF658Q5TYW1 1059 aaPredicted RBP33.49■■■□□ 2.95
CSNK1E-206ENST00000413574 ZNF598Q86UK7 904 aaKnown RBP33.49■■■□□ 2.95
CSNK1E-206ENST00000413574 RNF39Q9H2S5 420 aa33.49■■■□□ 2.95
CSNK1E-206ENST00000413574 TMEM206Q9H813 350 aa33.49■■■□□ 2.95
CSNK1E-206ENST00000413574 LRFN2Q9ULH4 789 aa33.49■■■□□ 2.95
CSNK1E-206ENST00000413574 CLDN3O15551 220 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 ZNF623O75123 536 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 BMP6P22004 513 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 RAB27AP51159 221 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 BMT2Q1RMZ1 405 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 NPAS4Q8IUM7 802 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 HERC6Q8IVU3 1022 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 CEP120Q8N960 986 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 APOL6Q9BWW8 343 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 TMEM161AQ9NX61 479 aa33.48■■■□□ 2.95
CSNK1E-206ENST00000413574 FGFR1P11362 822 aa33.47■■■□□ 2.95
CSNK1E-206ENST00000413574 GATMP50440 423 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 633.4 ms