RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 EAF2Q96CJ1 260 aaPredicted RBP15.58■□□□□ 0.08
CCDC50-201ENST00000392455 PPP1R16BQ96T49 567 aa15.58■□□□□ 0.08
CCDC50-201ENST00000392455 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.08
CCDC50-201ENST00000392455 PRPF4O43172 522 aaKnown RBP eCLIP15.58■□□□□ 0.08
CCDC50-201ENST00000392455 TFAMQ00059 246 aaKnown RBP15.58■□□□□ 0.08
CCDC50-201ENST00000392455 RBBP7Q16576 425 aa15.58■□□□□ 0.08
CCDC50-201ENST00000392455 SLC44A4Q53GD3 710 aa15.58■□□□□ 0.08
CCDC50-201ENST00000392455 SF3B1O75533 1304 aaKnown RBP eCLIP15.57■□□□□ 0.083e-6■■■■■ 137.9
CCDC50-201ENST00000392455 SPDYE5A6NIY4 337 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 RGS5O15539 181 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 DYNC1LI2O43237 492 aaPredicted RBP15.57■□□□□ 0.08
CCDC50-201ENST00000392455 TAB1Q15750 504 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 SPDYE7PQ495Y7 208 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 RASSF3Q86WH2 238 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 USP44Q9H0E7 712 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 RPAP3Q9H6T3 665 aaPredicted RBP15.57■□□□□ 0.08
CCDC50-201ENST00000392455 FNDC3AQ9Y2H6 1198 aaKnown RBP15.57■□□□□ 0.08
CCDC50-201ENST00000392455 YEATS2Q9ULM3 1422 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 CLIC2O15247 247 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 TBXAS1P24557 533 aaPredicted RBP15.57■□□□□ 0.08
CCDC50-201ENST00000392455 GTF2H3Q13889 308 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 RASGRP4Q8TDF6 673 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 IL1RAPL1Q9NZN1 696 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 TBK1Q9UHD2 729 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 HAUS5O94927 633 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 GOLGA8SH3BPF8 625 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 MYBL1P10243 752 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 PSMA2P25787 234 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 KRT73Q86Y46 540 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 C7orf31Q8N865 590 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 ANKRD12Q6UB98 2062 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 A0A1W2PQ27 194 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 A0A1W2PQ64 194 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 A0A1W2PQD8 194 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 GDF11O95390 407 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 KRT6AP02538 564 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 KRT6BP04259 564 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 TGFBR2P37173 567 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 KRT6CP48668 564 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 SLC30A9Q6PML9 568 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 SYDE1Q6ZW31 735 aaPredicted RBP15.57■□□□□ 0.08
CCDC50-201ENST00000392455 NFIBO00712 420 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 SLC16A2P36021 539 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 WLSQ5T9L3 541 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 ANKRD13CQ8N6S4 541 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 EGFL8Q99944 293 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 PALD1Q9ULE6 856 aa15.57■□□□□ 0.08
CCDC50-201ENST00000392455 SEMA3EO15041 775 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 SMYD4Q8IYR2 804 aaPredicted RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 KCNK16Q96T55 309 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 RWDD2AQ9UIY3 292 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ENC1O14682 589 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 HADHAP40939 763 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ARHGAP17Q68EM7 881 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ARL8AQ96BM9 186 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 DCUN1D1Q96GG9 259 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 CASS4Q9NQ75 786 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 GRID2IPA4D2P6 1211 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 KLHL24Q6TFL4 600 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 MTHFD1LQ6UB35 978 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ATP11CQ8NB49 1132 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 STAP1Q9ULZ2 295 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 STX7O15400 261 aaKnown RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 NSUN2Q08J23 767 aaKnown RBP eCLIP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ZNF568Q3ZCX4 644 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ATAD3BQ5T9A4 648 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 TMED8Q6PL24 325 aaPredicted RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ASAP3Q8TDY4 903 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 SMIM31A0A1B0GVY4 71 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 PPP6R2O75170 966 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ADCY1Q08828 1119 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 PPP1R14AQ96A00 147 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 TOPORSQ9NS56 1045 aaPredicted RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 VPS9D1Q9Y2B5 631 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 SERPINH1P50454 418 aaKnown RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 SFSWAPQ12872 951 aaKnown RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 ADCK5Q3MIX3 580 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 PROM2Q8N271 834 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 FLCNQ8NFG4 579 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 PPP2R3CQ969Q6 453 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 INTS13Q9NVM9 706 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 KPNB1Q14974 876 aaKnown RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 LRRC41Q15345 812 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 USP39Q53GS9 565 aaKnown RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 HABP4Q5JVS0 413 aaKnown RBP15.56■□□□□ 0.08
CCDC50-201ENST00000392455 SSH3Q8TE77 659 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 THAP9Q9H5L6 903 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 KRT84Q9NSB2 600 aa15.56■□□□□ 0.08
CCDC50-201ENST00000392455 KRT20P35900 424 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 OSTNP61366 133 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 TDRD7Q8NHU6 1098 aaKnown RBP15.55■□□□□ 0.08
CCDC50-201ENST00000392455 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.55■□□□□ 0.08
CCDC50-201ENST00000392455 ABCC4O15439 1325 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 UBN2Q6ZU65 1347 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 PRR23AA6NEV1 266 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 FAM47E-STBD1D6RA91 191 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 PDHA1P08559 390 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 URGCPQ8TCY9 931 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms