RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CSRP2Q16527 193 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 ABHD15Q6UXT9 468 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 RASSF3Q86WH2 238 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 XYLT1Q86Y38 959 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 GLB1L2Q8IW92 636 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
TRAV40-201ENST00000390467 ZNF276Q8N554 614 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 UBR7Q8N806 425 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 CEP89Q96ST8 783 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 AGAP2Q99490 1192 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 CPPED1Q9BRF8 314 aaPredicted RBP4.83□□□□□ -1.64
TRAV40-201ENST00000390467 MLST8Q9BVC4 326 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 ZNF768Q9H5H4 540 aaKnown RBP4.83□□□□□ -1.64
TRAV40-201ENST00000390467 EDARQ9UNE0 448 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.83□□□□□ -1.64
TRAV40-201ENST00000390467 A0A087X1B8 175 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 PRAMEF4O60810 478 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 DNAJC6O75061 913 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 RAB11FIP3O75154 756 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 LTA4HP09960 611 aaKnown RBP4.82□□□□□ -1.64
TRAV40-201ENST00000390467 XPAP23025 273 aaPredicted RBP4.82□□□□□ -1.64
TRAV40-201ENST00000390467 GZMKP49863 264 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 LGALS4P56470 323 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 WNT3AP56704 352 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 NRG3P56975 720 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 HDGFL2Q7Z4V5 671 aaPredicted RBP4.82□□□□□ -1.64
TRAV40-201ENST00000390467 OR14C36Q8NHC7 312 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 CPT1CQ8TCG5 803 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 USP7Q93009 1102 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 WNT8AQ9H1J5 351 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 EPC1Q9H2F5 836 aa4.82□□□□□ -1.64
TRAV40-201ENST00000390467 NOC2LQ9Y3T9 749 aaKnown RBP4.82□□□□□ -1.64
TRAV40-201ENST00000390467 ZMYM3Q14202 1370 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 AHRRA9YTQ3 701 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 APOBEC3AP31941 199 aaPredicted RBP4.81□□□□□ -1.64
TRAV40-201ENST00000390467 PTGS2P35354 604 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 FAM189BP81408 668 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 STRN3Q13033 797 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 VPS72Q15906 364 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 ANKS6Q68DC2 871 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 BTNL9Q6UXG8 535 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 DOK3Q7L591 496 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 GPRIN1Q7Z2K8 1008 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 MRGPRGQ86SM5 289 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 NOP9Q86U38 636 aaKnown RBP4.81□□□□□ -1.64
TRAV40-201ENST00000390467 ULK2Q8IYT8 1036 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 LENG9Q96B70 501 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 EAF2Q96CJ1 260 aaPredicted RBP4.81□□□□□ -1.64
TRAV40-201ENST00000390467 PDCD2LQ9BRP1 358 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 IFT22Q9H7X7 185 aa4.81□□□□□ -1.64
TRAV40-201ENST00000390467 LEFTY2O00292 366 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 TRIM24O15164 1050 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 SCAF4O95104 1147 aaKnown RBP4.8□□□□□ -1.64
TRAV40-201ENST00000390467 GYPEP15421 78 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 CTSSP25774 331 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 CANXP27824 592 aaKnown RBP4.8□□□□□ -1.64
TRAV40-201ENST00000390467 MEF2AQ02078 507 aaPredicted RBP4.8□□□□□ -1.64
TRAV40-201ENST00000390467 COL10A1Q03692 680 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 METTL24Q5JXM2 366 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 GIMAP6Q6P9H5 292 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 LRRC55Q6ZSA7 311 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 FAM83AQ86UY5 434 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 SYT12Q8IV01 421 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 CMIPQ8IY22 773 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 GLB1L3Q8NCI6 653 aaPredicted RBP4.8□□□□□ -1.64
TRAV40-201ENST00000390467 RSAD2Q8WXG1 361 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 CEP95Q96GE4 821 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 TTPALQ9BTX7 342 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 C11orf21Q9P2W6 132 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 CHST2Q9Y4C5 530 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 HS3ST4Q9Y661 456 aa4.8□□□□□ -1.64
TRAV40-201ENST00000390467 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.79□□□□□ -1.64
TRAV40-201ENST00000390467 WNT10BO00744 389 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 ADCY6O43306 1168 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 ITGA10O75578 1167 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 ENPP1P22413 925 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 INHBEP58166 350 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 FSCN1Q16658 493 aaKnown RBP4.79□□□□□ -1.64
TRAV40-201ENST00000390467 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRAV40-201ENST00000390467 VRK3Q8IV63 474 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 MDM1Q8TC05 714 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 SNX33Q8WV41 574 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 HAS1Q92839 578 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 TTC1Q99614 292 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 PRRX2Q99811 253 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 NDC1Q9BTX1 674 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 TEX101Q9BY14 249 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 KCNH6Q9H252 994 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 VTA1Q9NP79 307 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 USP35Q9P2H5 1018 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 DPP7Q9UHL4 492 aa4.79□□□□□ -1.64
TRAV40-201ENST00000390467 EIF2B4Q9UI10 523 aaKnown RBP4.79□□□□□ -1.64
TRAV40-201ENST00000390467 APOBEC2Q9Y235 224 aaKnown RBP4.79□□□□□ -1.64
TRAV40-201ENST00000390467 FOXN1O15353 648 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 LPXNO60711 386 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 RAMP2O60895 175 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 ITGB1P05556 798 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 SESN3P58005 492 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms