RNA–Protein interactions for RNA: ENST00000357977.5

NFIA-201, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 3,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-201ENST00000357977 REXO1Q8N1G1 1221 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 ARHGAP18Q8N392 663 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 PRELID2Q8N945 189 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 LNX1Q8TBB1 728 aaPredicted RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 CRNKL1Q9BZJ0 848 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 KIAA1683Q9H0B3 1180 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 DENND2DQ9H6A0 471 aaPredicted RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 TMEM260Q9NX78 707 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ARPP21Q9UBL0 812 aaPredicted RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 RPL26L1Q9UNX3 145 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 USP20Q9Y2K6 914 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 USH1CQ9Y6N9 552 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 NCANO14594 1321 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 SYNGAP1Q96PV0 1343 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 PDLIM1O00151 329 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 LGR5O75473 907 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 DCTN3O75935 186 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 EYA4O95677 639 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 RASA1P20936 1047 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 PSMC4P43686 418 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 IL9RQ01113 521 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 CALCOCO2Q13137 446 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ORC2Q13416 577 aaPredicted RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 RRP1BQ14684 758 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 HERC4Q5GLZ8 1057 aaPredicted RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 TCERG1LQ5VWI1 586 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 FOXB2Q5VYV0 432 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 CCNJLQ8IV13 435 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 CCDC65Q8IXS2 484 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 MIPOL1Q8TD10 442 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 SCG3Q8WXD2 468 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 ZWILCHQ9H900 591 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 EMILIN3Q9NT22 766 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 TMOD3Q9NYL9 352 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 PCYOX1Q9UHG3 505 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 STX8Q9UNK0 236 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 PTPN22Q9Y2R2 807 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 BOLA1Q9Y3E2 137 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 PCDHA3Q9Y5H8 950 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ZNF804BA4D1E1 1349 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ADAMTSL3P82987 1691 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 LAMB1P07942 1786 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 KLRF2D3W0D1 207 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ZSCAN9O15535 394 aaPredicted RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 TJP3O95049 919 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 TMEM253P0C7T8 217 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 XRCC5P13010 732 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 MARK3P27448 753 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 YARSP54577 528 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 JAM2P57087 298 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 TRMT10CQ7L0Y3 403 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ZC3H3Q8IXZ2 948 aaKnown RBP7.22□□□□□ -1.25
NFIA-201ENST00000357977 PTPRN2Q92932 1015 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ARHGEF26Q96DR7 871 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 TIPINQ9BVW5 301 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 NT5C3AQ9H0P0 336 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 GCNT4Q9P109 453 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ATXN10Q9UBB4 475 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 ASAP1Q9ULH1 1129 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 CHKBQ9Y259 395 aa7.22□□□□□ -1.25
NFIA-201ENST00000357977 KAT6BQ8WYB5 2073 aa7.21□□□□□ -1.25
NFIA-201ENST00000357977 NPHP3-ACAD11A0A0J9YXS1 232 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 TTLL1O95922 423 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 HSPA6P17066 643 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 TAC1P20366 129 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 TPP2P29144 1249 aaPredicted RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 SCNN1BP51168 640 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 OCRLQ01968 901 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 TNIP1Q15025 636 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 NKX1-1Q15270 411 aaPredicted RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 EDRF1Q3B7T1 1238 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 PPP1R21Q6ZMI0 780 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 SEPT14Q6ZU15 432 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 CCDC105Q8IYK2 499 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 ZDHHC14Q8IZN3 488 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 DDX17Q92841 729 aaKnown RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 ART4Q93070 314 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 SLC7A6OSQ96CW6 309 aaPredicted RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 PLEKHG4BQ96PX9 1271 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 ZHX3Q9H4I2 956 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 SUDS3Q9H7L9 328 aaPredicted RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 SIX2Q9NPC8 291 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 ATP8A2Q9NTI2 1148 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 DNAAF2Q9NVR5 837 aaKnown RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 MCM9Q9NXL9 1143 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 LARSQ9P2J5 1176 aaKnown RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 PCDHA2Q9Y5H9 948 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 NHSL1Q5SYE7 1610 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 PALM3A6NDB9 673 aaPredicted RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 WTIPA6NIX2 430 aaPredicted RBP7.21□□□□□ -1.26
NFIA-201ENST00000357977 SMAPO00193 183 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 ADAMTS2O95450 1211 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 USP17L8P0C7I0 530 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 STAT1P42224 750 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 MARCKSL1P49006 195 aa7.21□□□□□ -1.26
NFIA-201ENST00000357977 MCL1Q07820 350 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms