RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 NTPCRQ9BSD7 190 aaKnown RBP16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 JPH1Q9HDC5 661 aaPredicted RBP16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 USP20Q9Y2K6 914 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 NOC2LQ9Y3T9 749 aaKnown RBP16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 TELO2Q9Y4R8 837 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 CCDC188H7C350 402 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 BUB1BO60566 1050 aaPredicted RBP16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 CARSP49589 748 aaKnown RBP16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 SOX10P56693 466 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 PPATQ06203 517 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 DNAJC21Q5F1R6 531 aaKnown RBP16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 SWSAP1Q6NVH7 229 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 MCPH1Q8NEM0 835 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 PPM1EQ8WY54 764 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 ARHGEF26Q96DR7 871 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 SAAL1Q96ER3 474 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 MAF1Q9H063 256 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 A1CFQ9NQ94 594 aaKnown RBP16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 NFU1Q9UMS0 254 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 CD2APQ9Y5K6 639 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 NFASCO94856 1347 aa16.9■□□□□ 0.3
TSC22D3-201ENST00000315660 ESYT3A0FGR9 886 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 RAD51CO43502 376 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 OPA1O60313 960 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 DGAT1O75907 488 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 TTC31Q49AM3 519 aaPredicted RBP16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 KRT39Q6A163 491 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 RASGEF1CQ8N431 466 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.89■□□□□ 0.293e-6■■□□□ 14.4
TSC22D3-201ENST00000315660 KAT5Q92993 513 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 THAP2Q9H0W7 228 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 HOXC10Q9NYD6 342 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 DIS3Q9Y2L1 958 aaKnown RBP16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 PFASO15067 1338 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 KRIT1O00522 736 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 CLSTN1O94985 981 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 USP8P40818 1118 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 MFAP3P55082 362 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 CCDC127Q96BQ5 260 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 SLC9A2Q9UBY0 812 aa16.89■□□□□ 0.29
TSC22D3-201ENST00000315660 ABCD1P33897 745 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 ACTR2P61160 394 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 SP4Q02446 784 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 MAP2K1Q02750 393 aaPredicted RBP16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 SLC39A4Q6P5W5 647 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 CCDC60Q8IWA6 550 aaPredicted RBP16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 PPM1KQ8N3J5 372 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 EIF1ADQ8N9N8 165 aaKnown RBP16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 TSEN2Q8NCE0 465 aaKnown RBP16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 PARD3BQ8TEW8 1205 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 WHAMMQ8TF30 809 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 CASKIN2Q8WXE0 1202 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 POMGNT1Q8WZA1 660 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 TMEM8AQ9HCN3 771 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 PDLIM7Q9NR12 457 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 KIAA1217Q5T5P2 1943 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 SSC5DA1L4H1 1573 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 FAM170AA1A519 330 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 SPDYE16A6NNV3 312 aaPredicted RBP16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 SPATA31C2B4DYI2 1134 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 GOLGA8KD6RF30 607 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 H0YCG3 227 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 RTP1P59025 263 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 PRKCEQ02156 737 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 NOL9Q5SY16 702 aaKnown RBP16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 MIS18BP1Q6P0N0 1132 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 ABHD15Q6UXT9 468 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 EFCAB13Q8IY85 973 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 SEMA4DQ92854 862 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 IFT74Q96LB3 600 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 FBXL18Q96ME1 805 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 AP1M1Q9BXS5 423 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 FAM107BQ9H098 131 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 XPNPEP1Q9NQW7 623 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 SEPT9Q9UHD8 586 aaPredicted RBP16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 PPP2R3BQ9Y5P8 575 aa16.88■□□□□ 0.29
TSC22D3-201ENST00000315660 ADGRA3Q8IWK6 1321 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 FTLP02792 175 aaPredicted RBP16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 PPFIA1Q13136 1202 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 CUL1Q13616 776 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 FAM71AQ8IYT1 594 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 RPUSD2Q8IZ73 545 aaKnown RBP16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 TMC2Q8TDI7 906 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 KREMEN1Q96MU8 473 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 NAP1L3Q99457 506 aaPredicted RBP16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 ISCUQ9H1K1 167 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 TAF1DQ9H5J8 278 aaPredicted RBP16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 ATP6V0A4Q9HBG4 840 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.87■□□□□ 0.293e-16■■■■■ 205
TSC22D3-201ENST00000315660 GPRC5DQ9NZD1 345 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 TTC7AQ9ULT0 858 aaPredicted RBP16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 COG5Q9UP83 839 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 WDR81Q562E7 1941 aa16.87■□□□□ 0.29
TSC22D3-201ENST00000315660 HNRNPDLO14979 420 aaKnown RBP16.86■□□□□ 0.29
TSC22D3-201ENST00000315660 SART1O43290 800 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms