RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 Lig3P97386 1015 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Tfdp1Q08639 410 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Asprv1Q09PK2 339 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Hook2Q7TMK6 716 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 AarsQ8BGQ7 968 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Rd3Q8BRE0 195 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 SheQ8BSD5 492 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Doc2gQ9ESN1 387 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Homer2Q9QWW1 354 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 TfebQ9R210 475 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Cntnap4Q99P47 1310 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm4756A0A140LIS8 335 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Pramel3A2AHA7 463 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm7903A2AWL1 463 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Zfp651E9PZ11 729 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Lmod3E9QA62 571 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 P01734 135 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 FechP22315 420 aaKnown RBP15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ercc5P35689 1170 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Scarf2P59222 833 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 PrkcbP68404 671 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Nat8lQ3UGX3 299 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ubash3aQ3V3E1 624 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Dmc1Q61880 340 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Armcx2Q6A058 784 aaKnown RBP15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Shkbp1Q6P7W2 704 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Rimbp2Q80U40 1072 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Acvr1cQ8K348 493 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Hexim1Q8R409 356 aaKnown RBP15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ears2Q9CXJ1 523 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Mis18aQ9CZJ6 204 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gyg1Q9R062 333 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Krt85Q9Z2T6 507 aa15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ktn1Q61595 1327 aaKnown RBP15.11■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ace3D0G895 737 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Maml3D4QGC2 1135 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ccdc152E9PX14 254 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm10134F6ZQC6 126 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 DgkaO88673 730 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Surf1P09925 306 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 PdgfbP31240 241 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Edem3Q2HXL6 931 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Pnma5Q5DTT8 618 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Msantd2Q6NZR2 559 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Lrfn2Q80TG9 788 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 CyldQ80TQ2 952 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Qsox1Q8BND5 748 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ttc39bQ8BYY4 617 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ccdc113Q8C5T8 377 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Stoml1Q8CI66 399 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Fam20aQ8CID3 541 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Scyl1Q9EQC5 806 aaKnown RBP15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Hebp1Q9R257 190 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Plcb1Q9Z1B3 1216 aa15.1■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 CntrlA2AL36 2334 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 DohhA0A1Y7VJ29 135 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Krt78E9Q0F0 1068 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 AurkbO70126 345 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Psmc3O88685 442 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Hoxd8P23463 289 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Col9a1Q05722 921 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Rbm20Q3UQS8 1199 aaKnown RBP15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Zscan4fQ3URS2 506 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Zbtb8osQ505B7 168 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gpbp1Q6NXH3 473 aaKnown RBP15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Pnma2Q8BHK0 365 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 AtripQ8BMG1 785 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Art3Q8R2G4 371 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Cacnb1Q8R3Z5 597 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Snx10Q9CWT3 201 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Akr1a1Q9JII6 325 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 PollQ9QXE2 573 aaKnown RBP15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Cntnap5aQ0V8T9 1304 aa15.09■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Adamts20P59511 1906 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Myo16Q5DU14 1919 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Klhdc7aA2APT9 773 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 ZxdbA2CE44 873 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 1700064H15RikD3Z4D4 81 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 BC049352E9Q2Z6 85 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Gm17535J3KMR8 224 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Rabep1O35551 862 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Cyb5r4Q3TDX8 528 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Hace1Q3U0D9 909 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Fam196aQ3USH1 422 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 H2-Q2Q4KN81 360 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Adamts18Q4VC17 1219 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Leo1Q5XJE5 667 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Prpf4bQ61136 1007 aaKnown RBP15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 AlcamQ61490 583 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Zc3h6Q8BYK8 1177 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 RtknQ8C6B2 564 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Kct2Q8K201 259 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Fbxo18Q8K2I9 1042 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Kdm4cQ8VCD7 1054 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Zmat2Q9CPW7 199 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Smc1aQ9CU62 1233 aaKnown RBP15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Cd2bp2Q9CWK3 342 aaKnown RBP15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Armc9Q9D2I5 817 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 Plxna3P70208 1872 aa15.08■□□□□ 0
Ccdc58-201ENSMUST00000099937 1700018F24RikB2RW27 314 aa15.07■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 63.1 ms