RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 YHR022CP38763 256 aa-0.51□□□□□ -2.49
snR50snR50 AVT6P40074 448 aa-0.51□□□□□ -2.49
snR50snR50 ARF3P40994 183 aaRIP-Chip data-0.51□□□□□ -2.49not detected
snR50snR50 YNR066CP53752 436 aa-0.51□□□□□ -2.49
snR50snR50 CYT2Q00873 224 aa-0.51□□□□□ -2.49
snR50snR50 YMR114CQ04471 368 aaKnown RBP-0.51□□□□□ -2.49
snR50snR50 CTR3Q06686 241 aa-0.51□□□□□ -2.49
snR50snR50 VIK1Q12045 647 aa-0.51□□□□□ -2.49
snR50snR50 ATG5Q12380 294 aa-0.51□□□□□ -2.49
snR50snR50 CLB3P24870 427 aa-0.52□□□□□ -2.49
snR50snR50 RIM1P32445 135 aaKnown RBP-0.52□□□□□ -2.49
snR50snR50 UGX2P32772 223 aa-0.52□□□□□ -2.49
snR50snR50 YSC83P32792 385 aa-0.52□□□□□ -2.49
snR50snR50 MRPL6P32904 214 aa-0.52□□□□□ -2.49
snR50snR50 MRPS5P33759 307 aa-0.52□□□□□ -2.49
snR50snR50 KTI12P34253 313 aaKnown RBP-0.52□□□□□ -2.49
snR50snR50 TOM20P35180 183 aa-0.52□□□□□ -2.49
snR50snR50 BIG1P38813 335 aa-0.52□□□□□ -2.49
snR50snR50 VID27P40157 782 aa-0.52□□□□□ -2.49
snR50snR50 GON7P46984 123 aa-0.52□□□□□ -2.49
snR50snR50 LST7P53237 242 aa-0.52□□□□□ -2.49
snR50snR50 ERV29P53337 310 aa-0.52□□□□□ -2.49
snR50snR50 DBP6P53734 629 aaKnown RBP-0.52□□□□□ -2.49
snR50snR50 MRPS8Q03799 155 aa-0.52□□□□□ -2.49
snR50snR50 ATG16Q03818 150 aa-0.52□□□□□ -2.49
snR50snR50 SEC13Q04491 297 aaKnown RBP-0.52□□□□□ -2.49
snR50snR50 PEX10Q05568 337 aa-0.52□□□□□ -2.49
snR50snR50 NDL1Q06568 189 aa-0.52□□□□□ -2.49
snR50snR50 IMH1Q06704 911 aaKnown RBP-0.52□□□□□ -2.49
snR50snR50 MRX9Q07349 420 aaKnown RBP-0.52□□□□□ -2.49
snR50snR50 DCI1Q08558 271 aa-0.52□□□□□ -2.49
snR50snR50 NFI1Q12216 726 aa-0.52□□□□□ -2.49
snR50snR50 MHT1Q12525 324 aa-0.52□□□□□ -2.49
snR50snR50 FSH3Q99369 266 aa-0.52□□□□□ -2.49
snR50snR50 NUP157P40064 1391 aaKnown RBP-0.53□□□□□ -2.49
snR50snR50 YEL009C-AA0A023PZF2 135 aa-0.53□□□□□ -2.49
snR50snR50 OSM1P21375 501 aaKnown RBP-0.53□□□□□ -2.49
snR50snR50 PHO91P27514 894 aa-0.53□□□□□ -2.49
snR50snR50 BMH1P29311 267 aaKnown RBP-0.53□□□□□ -2.49
snR50snR50 ERG9P29704 444 aa-0.53□□□□□ -2.49
snR50snR50 MCM10P32354 571 aa-0.53□□□□□ -2.49
snR50snR50 SLM4P38247 162 aa-0.53□□□□□ -2.49
snR50snR50 PHO88P38264 188 aaPredicted RBP-0.53□□□□□ -2.49
snR50snR50 ARN2P38724 620 aa-0.53□□□□□ -2.49
snR50snR50 CAJ1P39101 391 aa-0.53□□□□□ -2.49
snR50snR50 RIO2P40160 425 aaKnown RBP-0.53□□□□□ -2.49
snR50snR50 LYS12P40495 371 aaKnown RBP-0.53□□□□□ -2.49
snR50snR50 ARX1Q03862 593 aaKnown RBP-0.53□□□□□ -2.49
snR50snR50 GYL1Q04322 720 aa-0.53□□□□□ -2.49
snR50snR50 YPL162CQ12042 273 aa-0.53□□□□□ -2.49
snR50snR50 RRG1Q12167 365 aaPredicted RBP-0.53□□□□□ -2.49
snR50snR50 QCR8P08525 94 aa-0.54□□□□□ -2.5
snR50snR50 REC107P21651 314 aa-0.54□□□□□ -2.5
snR50snR50 CPR2P23285 205 aa-0.54□□□□□ -2.5
snR50snR50 MDH3P32419 343 aaKnown RBP RIP-Chip data-0.54□□□□□ -2.5not detected
snR50snR50 MRPL3P36516 390 aa-0.54□□□□□ -2.5
snR50snR50 SVP26P38869 228 aa-0.54□□□□□ -2.5
snR50snR50 LCP5P40079 357 aaPredicted RBP-0.54□□□□□ -2.5
snR50snR50 SOK1P40317 901 aa-0.54□□□□□ -2.5
snR50snR50 PRP24P49960 444 aaKnown RBP-0.54□□□□□ -2.5
snR50snR50 TIM21P53220 239 aa-0.54□□□□□ -2.5
snR50snR50 RET3P53600 189 aa-0.54□□□□□ -2.5
snR50snR50 ASI3P53983 676 aa-0.54□□□□□ -2.5
snR50snR50 ECM18Q04623 453 aa-0.54□□□□□ -2.5
snR50snR50 SML1Q04964 104 aa-0.54□□□□□ -2.5
snR50snR50 YLR456WQ06199 204 aa-0.54□□□□□ -2.5
snR50snR50 SFI1Q12369 946 aa-0.54□□□□□ -2.5
snR50snR50 ISN1Q99312 450 aa-0.54□□□□□ -2.5
snR50snR50 FMP49A0A023PZB3 126 aa-0.55□□□□□ -2.5
snR50snR50 YBR056W-AI2HB52 66 aa-0.55□□□□□ -2.5
snR50snR50 RAD3P06839 778 aa-0.55□□□□□ -2.5
snR50snR50 SAS3P34218 831 aa-0.55□□□□□ -2.5
snR50snR50 NOC2P39744 710 aaKnown RBP-0.55□□□□□ -2.5
snR50snR50 NDE1P40215 560 aa-0.55□□□□□ -2.5
snR50snR50 RPE1P46969 238 aa-0.55□□□□□ -2.5
snR50snR50 KEL2P50090 882 aa-0.55□□□□□ -2.5
snR50snR50 CSM3Q04659 317 aa-0.55□□□□□ -2.5
snR50snR50 USB1Q12208 290 aaKnown RBP-0.55□□□□□ -2.5
snR50snR50 YOL159C-AQ3E769 90 aa-0.55□□□□□ -2.5
snR50snR50 PAN1P32521 1480 aa-0.55□□□□□ -2.5
snR50snR50 FLO9P39712 1322 aa-0.56□□□□□ -2.5
snR50snR50 RSR1P13856 272 aa-0.56□□□□□ -2.5
snR50snR50 RED1P14291 827 aa-0.56□□□□□ -2.5
snR50snR50 CKA1P15790 372 aa-0.56□□□□□ -2.5
snR50snR50 ARF2P19146 181 aaKnown RBP-0.56□□□□□ -2.5
snR50snR50 YCR051WP25631 222 aa-0.56□□□□□ -2.5
snR50snR50 PWP2P25635 923 aaKnown RBP-0.56□□□□□ -2.5
snR50snR50 SSH4P32343 579 aa-0.56□□□□□ -2.5
snR50snR50 GDH2P33327 1092 aaKnown RBP-0.56□□□□□ -2.5
snR50snR50 VPS24P36095 224 aaKnown RBP-0.56□□□□□ -2.5
snR50snR50 YHI9P38765 294 aa-0.56□□□□□ -2.5
snR50snR50 ATG7P38862 630 aa-0.56□□□□□ -2.5
snR50snR50 SER3P40054 469 aa-0.56□□□□□ -2.5
snR50snR50 YKE4P40544 346 aa-0.56□□□□□ -2.5
snR50snR50 TAD2P47058 250 aa-0.56□□□□□ -2.5
snR50snR50 SWT21P53873 357 aaPredicted RBP-0.56□□□□□ -2.5
snR50snR50 RDL2Q08742 149 aaKnown RBP-0.56□□□□□ -2.5
snR50snR50 PRM3Q08931 133 aa-0.56□□□□□ -2.5
snR50snR50 SMT3Q12306 101 aaKnown RBP-0.56□□□□□ -2.5
snR50snR50 MRPL23Q12487 163 aaPredicted RBP-0.56□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms