RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 SMP3Q04174 516 aa-1.35□□□□□ -2.63
snR47snR47 GYL1Q04322 720 aa-1.35□□□□□ -2.63
snR47snR47 ARC18Q05933 178 aaKnown RBP-1.35□□□□□ -2.63
snR47snR47 RPN5Q12250 445 aaKnown RBP-1.35□□□□□ -2.63
snR47snR47 ATG5Q12380 294 aa-1.35□□□□□ -2.63
snR47snR47 MHT1Q12525 324 aa-1.35□□□□□ -2.63
snR47snR47 FLO9P39712 1322 aa-1.36□□□□□ -2.63
snR47snR47 CCA1P21269 546 aa-1.36□□□□□ -2.63
snR47snR47 NRP1P32770 719 aaKnown RBP RIP-Chip data-1.36□□□□□ -2.63not detected
snR47snR47 BIG1P38813 335 aa-1.36□□□□□ -2.63
snR47snR47 YNR066CP53752 436 aa-1.36□□□□□ -2.63
snR47snR47 PEX10Q05568 337 aa-1.36□□□□□ -2.63
snR47snR47 YDL144CQ07589 356 aa-1.36□□□□□ -2.63
snR47snR47 YPL245WQ12179 454 aaKnown RBP-1.36□□□□□ -2.63
snR47snR47 NUP157P40064 1391 aaKnown RBP-1.36□□□□□ -2.63
snR47snR47 ACC1Q00955 2233 aaKnown RBP-1.37□□□□□ -2.63
snR47snR47 YBR056W-AI2HB52 66 aa-1.37□□□□□ -2.63
snR47snR47 RSR1P13856 272 aa-1.37□□□□□ -2.63
snR47snR47 RPL16BP26785 198 aaKnown RBP-1.37□□□□□ -2.63
snR47snR47 PHO88P38264 188 aaPredicted RBP-1.37□□□□□ -2.63
snR47snR47 YFL064CP43540 174 aa-1.37□□□□□ -2.63
snR47snR47 RTT102P53330 157 aa-1.37□□□□□ -2.63
snR47snR47 YPL162CQ12042 273 aa-1.37□□□□□ -2.63
snR47snR47 ISD11Q6Q560 94 aa-1.37□□□□□ -2.63
snR47snR47 FMP49A0A023PZB3 126 aa-1.38□□□□□ -2.63
snR47snR47 MCM10P32354 571 aa-1.38□□□□□ -2.63
snR47snR47 AVT6P40074 448 aa-1.38□□□□□ -2.63
snR47snR47 RPE1P46969 238 aa-1.38□□□□□ -2.63
snR47snR47 SEC13Q04491 297 aaKnown RBP-1.38□□□□□ -2.63
snR47snR47 AAD15Q08361 143 aa-1.38□□□□□ -2.63
snR47snR47 PRM3Q08931 133 aa-1.38□□□□□ -2.63
snR47snR47 RRG1Q12167 365 aaPredicted RBP-1.38□□□□□ -2.63
snR47snR47 MSB2P32334 1306 aa-1.39□□□□□ -2.63
snR47snR47 MRPS5P33759 307 aa-1.39□□□□□ -2.63
snR47snR47 VID27P40157 782 aa-1.39□□□□□ -2.63
snR47snR47 VPS72Q03388 795 aa-1.39□□□□□ -2.63
snR47snR47 ARX1Q03862 593 aaKnown RBP-1.39□□□□□ -2.63
snR47snR47 SML1Q04964 104 aa-1.39□□□□□ -2.63
snR47snR47 PRM4Q12498 284 aa-1.39□□□□□ -2.63
snR47snR47 MXR2P25566 168 aa-1.4□□□□□ -2.63
snR47snR47 RIM1P32445 135 aaKnown RBP-1.4□□□□□ -2.63
snR47snR47 KTI12P34253 313 aaKnown RBP-1.4□□□□□ -2.63
snR47snR47 DRE2P36152 348 aa-1.4□□□□□ -2.63
snR47snR47 SPT8P38915 602 aa-1.4□□□□□ -2.63
snR47snR47 LST7P53237 242 aa-1.4□□□□□ -2.63
snR47snR47 ECM18Q04623 453 aa-1.4□□□□□ -2.63
snR47snR47 DCI1Q08558 271 aa-1.4□□□□□ -2.63
snR47snR47 FSH3Q99369 266 aa-1.4□□□□□ -2.63
snR47snR47 ARG3P05150 338 aa-1.41□□□□□ -2.64
snR47snR47 YHR212W-AP0CX91 67 aa-1.41□□□□□ -2.64
snR47snR47 MDH3P32419 343 aaKnown RBP RIP-Chip data-1.41□□□□□ -2.64not detected
snR47snR47 GCG1P32656 232 aaKnown RBP-1.41□□□□□ -2.64
snR47snR47 FZF1P32805 299 aa-1.41□□□□□ -2.64
snR47snR47 MRPL6P32904 214 aa-1.41□□□□□ -2.64
snR47snR47 ARN2P38724 620 aa-1.41□□□□□ -2.64
snR47snR47 DBP6P53734 629 aaKnown RBP-1.41□□□□□ -2.64
snR47snR47 DTD1Q07648 150 aaKnown RBP-1.41□□□□□ -2.64
snR47snR47 SFI1Q12369 946 aa-1.41□□□□□ -2.64
snR47snR47 ISN1Q99312 450 aa-1.41□□□□□ -2.64
snR47snR47 PHO91P27514 894 aa-1.42□□□□□ -2.64
snR47snR47 BMH1P29311 267 aaKnown RBP-1.42□□□□□ -2.64
snR47snR47 UTP9P38882 575 aaKnown RBP-1.42□□□□□ -2.64
snR47snR47 YEA4P40004 342 aa-1.42□□□□□ -2.64
snR47snR47 CSM3Q04659 317 aa-1.42□□□□□ -2.64
snR47snR47 YOL159C-AQ3E769 90 aa-1.42□□□□□ -2.64
snR47snR47 YBL112CQ3E7Y4 105 aa-1.42□□□□□ -2.64
snR47snR47 YEL009C-AA0A023PZF2 135 aa-1.43□□□□□ -2.64
snR47snR47 YCR025CP25352 136 aa-1.43□□□□□ -2.64
snR47snR47 EFB1P32471 206 aaKnown RBP-1.43□□□□□ -2.64
snR47snR47 SAS3P34218 831 aa-1.43□□□□□ -2.64
snR47snR47 GPX1P36014 167 aa-1.43□□□□□ -2.64
snR47snR47 PET8P38921 284 aa-1.43□□□□□ -2.64
snR47snR47 YIL012WP40551 113 aa-1.43□□□□□ -2.64
snR47snR47 PRP24P49960 444 aaKnown RBP-1.43□□□□□ -2.64
snR47snR47 SWT21P53873 357 aaPredicted RBP-1.43□□□□□ -2.64
snR47snR47 MRPL19P53875 158 aa-1.43□□□□□ -2.64
snR47snR47 MSA1Q08471 629 aa-1.43□□□□□ -2.64
snR47snR47 USB1Q12208 290 aaKnown RBP-1.43□□□□□ -2.64
snR47snR47 TAO3P40468 2376 aa-1.43□□□□□ -2.64
snR47snR47 OSM1P21375 501 aaKnown RBP-1.44□□□□□ -2.64
snR47snR47 GDH2P33327 1092 aaKnown RBP-1.44□□□□□ -2.64
snR47snR47 MRPL3P36516 390 aa-1.44□□□□□ -2.64
snR47snR47 ATG7P38862 630 aa-1.44□□□□□ -2.64
snR47snR47 YHR177WP38867 453 aa-1.44□□□□□ -2.64
snR47snR47 SVP26P38869 228 aa-1.44□□□□□ -2.64
snR47snR47 NDE1P40215 560 aa-1.44□□□□□ -2.64
snR47snR47 AGE2P40529 298 aa-1.44□□□□□ -2.64
snR47snR47 YKE4P40544 346 aa-1.44□□□□□ -2.64
snR47snR47 AKR2Q12013 749 aa-1.44□□□□□ -2.64
snR47snR47 YNL146C-AQ3E7Z1 64 aa-1.44□□□□□ -2.64
snR47snR47 MDL1P33310 695 aa-1.45□□□□□ -2.64
snR47snR47 SLM4P38247 162 aa-1.45□□□□□ -2.64
snR47snR47 SER3P40054 469 aa-1.45□□□□□ -2.64
snR47snR47 LCP5P40079 357 aaPredicted RBP-1.45□□□□□ -2.64
snR47snR47 LYS12P40495 371 aaKnown RBP-1.45□□□□□ -2.64
snR47snR47 YFL065CP43539 102 aa-1.45□□□□□ -2.64
snR47snR47 TAD2P47058 250 aa-1.45□□□□□ -2.64
snR47snR47 MAL13P53338 473 aa-1.45□□□□□ -2.64
snR47snR47 YNL143CP53908 130 aa-1.45□□□□□ -2.64
snR47snR47 DIG2Q03373 323 aaKnown RBP-1.45□□□□□ -2.64
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms