RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C UBC9P50623 157 aaPredicted RBP2.28□□□□□ -2.05
SIR3YLR442C ERV14P53173 138 aa2.28□□□□□ -2.05
SIR3YLR442C RSM27P53305 110 aa2.28□□□□□ -2.05
SIR3YLR442C TPS1Q00764 495 aaKnown RBP2.28□□□□□ -2.05
SIR3YLR442C NUP49Q02199 472 aa2.28□□□□□ -2.05
SIR3YLR442C ATP25Q03153 612 aa2.28□□□□□ -2.05
SIR3YLR442C PEX27Q08580 376 aa2.28□□□□□ -2.05
SIR3YLR442C JLP1Q12358 412 aa2.28□□□□□ -2.05
SIR3YLR442C ERP3Q12403 225 aa2.28□□□□□ -2.05
SIR3YLR442C RPS21BQ3E754 87 aaKnown RBP2.28□□□□□ -2.05
SIR3YLR442C GAL80P04387 435 aa2.27□□□□□ -2.05
SIR3YLR442C ATP1P07251 545 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C YLL053CP0CD98 152 aa2.27□□□□□ -2.05
SIR3YLR442C CUP2P15315 225 aa2.27□□□□□ -2.05
SIR3YLR442C MRPL44P19956 98 aa2.27□□□□□ -2.05
SIR3YLR442C SAG1P20840 650 aa2.27□□□□□ -2.05
SIR3YLR442C IME1P21190 360 aa2.27□□□□□ -2.05
SIR3YLR442C YCR023CP25351 611 aa2.27□□□□□ -2.05
SIR3YLR442C YIM1P28625 365 aa2.27□□□□□ -2.05
SIR3YLR442C PEX4P29340 183 aa2.27□□□□□ -2.05
SIR3YLR442C MSS51P32335 436 aa2.27□□□□□ -2.05
SIR3YLR442C YKL151CP36059 337 aa2.27□□□□□ -2.05
SIR3YLR442C SKG1P36169 355 aa2.27□□□□□ -2.05
SIR3YLR442C LSM4P40070 187 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C LAS21P40367 830 aa2.27□□□□□ -2.05
SIR3YLR442C PMT6P42934 759 aa2.27□□□□□ -2.05
SIR3YLR442C SNG1P46950 547 aa2.27□□□□□ -2.05
SIR3YLR442C IKS1P47042 667 aa2.27□□□□□ -2.05
SIR3YLR442C AVT4P50944 713 aa2.27□□□□□ -2.05
SIR3YLR442C BRR6P53062 197 aa2.27□□□□□ -2.05
SIR3YLR442C YAT1P80235 687 aa2.27□□□□□ -2.05
SIR3YLR442C YPL108WQ02872 168 aaPredicted RBP2.27□□□□□ -2.05
SIR3YLR442C GPI17Q04080 534 aa2.27□□□□□ -2.05
SIR3YLR442C AIM33Q04516 312 aa2.27□□□□□ -2.05
SIR3YLR442C TRI1Q05024 226 aa2.27□□□□□ -2.05
SIR3YLR442C MDM30Q05930 598 aa2.27□□□□□ -2.05
SIR3YLR442C IPK1Q06667 281 aa2.27□□□□□ -2.05
SIR3YLR442C SYC1Q08553 188 aaPredicted RBP2.27□□□□□ -2.05
SIR3YLR442C POM34Q12445 299 aa2.27□□□□□ -2.05
SIR3YLR442C YKL183C-AQ3E765 70 aa2.27□□□□□ -2.05
SIR3YLR442C CAT8P39113 1433 aa2.27□□□□□ -2.05
SIR3YLR442C ESC1Q03661 1658 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C PDR10P51533 1564 aa2.27□□□□□ -2.05
SIR3YLR442C HAP1P0CE41 1502 aa2.27□□□□□ -2.05
SIR3YLR442C DIF1O13577 133 aa2.27□□□□□ -2.05
SIR3YLR442C PPR1P07272 904 aaPredicted RBP2.27□□□□□ -2.05
SIR3YLR442C YEL076C-AP0CX16 216 aa2.27□□□□□ -2.05
SIR3YLR442C YLR464WP0CX17 216 aa2.27□□□□□ -2.05
SIR3YLR442C YER190C-BP0CX94 160 aa2.27□□□□□ -2.05
SIR3YLR442C YEL077W-AP0CX95 160 aa2.27□□□□□ -2.05
SIR3YLR442C YGR296C-BP0CX96 160 aa2.27□□□□□ -2.05
SIR3YLR442C YPL283W-BP0CX97 160 aa2.27□□□□□ -2.05
SIR3YLR442C YPR204C-AP0CX98 160 aa2.27□□□□□ -2.05
SIR3YLR442C GCY1P14065 312 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SIR3YLR442C ACO1P19414 778 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SIR3YLR442C PHO13P19881 312 aa2.27□□□□□ -2.05
SIR3YLR442C GPI12P23797 304 aa2.27□□□□□ -2.05
SIR3YLR442C FEN2P25621 512 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C YIH1P25637 258 aa2.27□□□□□ -2.05
SIR3YLR442C ARP2P32381 391 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C AEP1P32493 518 aa2.27□□□□□ -2.05
SIR3YLR442C PRS4P38063 326 aaPredicted RBP2.27□□□□□ -2.05
SIR3YLR442C YBR220CP38318 560 aa2.27□□□□□ -2.05
SIR3YLR442C YPT35P38815 214 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C IKI1P38874 309 aa2.27□□□□□ -2.05
SIR3YLR442C MLH1P38920 769 aa2.27□□□□□ -2.05
SIR3YLR442C YJL193WP39542 402 aa2.27□□□□□ -2.05
SIR3YLR442C PAC2P39937 518 aa2.27□□□□□ -2.05
SIR3YLR442C YEL076CP39971 216 aa2.27□□□□□ -2.05
SIR3YLR442C HYR1P40581 163 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C MEP2P41948 499 aa2.27□□□□□ -2.05
SIR3YLR442C YGR210CP42942 411 aa2.27□□□□□ -2.05
SIR3YLR442C ASG7P46993 209 aa2.27□□□□□ -2.05
SIR3YLR442C HHO1P53551 258 aa2.27□□□□□ -2.05
SIR3YLR442C GMC1Q04399 608 aa2.27□□□□□ -2.05
SIR3YLR442C CRD1Q07560 283 aa2.27□□□□□ -2.05
SIR3YLR442C PLB3Q08108 686 aa2.27□□□□□ -2.05
SIR3YLR442C AAD15Q08361 143 aa2.27□□□□□ -2.05
SIR3YLR442C YLR050CQ12155 161 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C PST2Q12335 198 aaKnown RBP2.27□□□□□ -2.05
SIR3YLR442C DGK1Q12382 290 aa2.27□□□□□ -2.05
SIR3YLR442C RKR1Q04781 1562 aa2.27□□□□□ -2.05
SIR3YLR442C RSF2P46974 1380 aa2.26□□□□□ -2.05
SIR3YLR442C DNA2P38859 1522 aa2.26□□□□□ -2.05
SIR3YLR442C HIS1P00498 297 aaKnown RBP2.26□□□□□ -2.05
SIR3YLR442C CDC7P06243 507 aa2.26□□□□□ -2.05
SIR3YLR442C SPE1P08432 466 aa2.26□□□□□ -2.05
SIR3YLR442C PBI2P0CT04 75 aaKnown RBP2.26□□□□□ -2.05
SIR3YLR442C EPT1P22140 391 aa2.26□□□□□ -2.05
SIR3YLR442C SGV1P23293 657 aaKnown RBP2.26□□□□□ -2.05
SIR3YLR442C KAR4P25583 335 aa2.26□□□□□ -2.05
SIR3YLR442C FUB1P25659 250 aa2.26□□□□□ -2.05
SIR3YLR442C MSK1P32048 576 aa2.26□□□□□ -2.05
SIR3YLR442C RIM1P32445 135 aaKnown RBP2.26□□□□□ -2.05
SIR3YLR442C SRB5P32585 307 aa2.26□□□□□ -2.05
SIR3YLR442C EMP70P32802 667 aa2.26□□□□□ -2.05
SIR3YLR442C AUR1P36107 401 aaPredicted RBP2.26□□□□□ -2.05
SIR3YLR442C CUE1P38428 203 aa2.26□□□□□ -2.05
SIR3YLR442C OXA1P39952 402 aa2.26□□□□□ -2.05
SIR3YLR442C MAF1P41910 395 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 274 ms