RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NMD3	YHR170W	YGR151C	P53287	111 aa		4.15	□□□□□ -1.74
NMD3	YHR170W	NRM1	P53718	249 aa		4.15	□□□□□ -1.74
NMD3	YHR170W	SWP1	Q02795	286 aa		4.15	□□□□□ -1.74
NMD3	YHR170W	ATG38	Q05789	226 aa	Known RBP	4.15	□□□□□ -1.74
NMD3	YHR170W	YLR030W	Q07967	263 aa		4.15	□□□□□ -1.74
NMD3	YHR170W	SKI7	Q08491	747 aa	Predicted RBP	4.15	□□□□□ -1.74
NMD3	YHR170W	HER1	Q12276	1246 aa		4.15	□□□□□ -1.74
NMD3	YHR170W	PST2	Q12335	198 aa	Known RBP	4.15	□□□□□ -1.74
NMD3	YHR170W	SEN1	Q00416	2231 aa	Known RBP	4.15	□□□□□ -1.74
NMD3	YHR170W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
NMD3	YHR170W	PRP21	P32524	280 aa	Predicted RBP	4.14	□□□□□ -1.75
NMD3	YHR170W	SEF1	P34228	1148 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	FES1	P38260	290 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	SBE22	P38814	852 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	WSS1	P38838	269 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	YIL086C	P40503	102 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	SNM1	P40993	198 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	SWP82	P43554	623 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	RPS12	P48589	143 aa	Known RBP	4.14	□□□□□ -1.75
NMD3	YHR170W	YGR066C	P53242	292 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	YPL068C	Q02749	293 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	YMD8	Q03697	442 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	DIC1	Q06143	298 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	ARV1	Q06541	321 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	YDL086W	Q07505	273 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	GSH2	Q08220	491 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	YGK3	Q12222	375 aa	Predicted RBP	4.14	□□□□□ -1.75
NMD3	YHR170W	SEC12	P11655	471 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	GPI12	P23797	304 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	YCR100C	P25606	316 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	ECM4	P36156	370 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	GOS1	P38736	223 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	TRR2	P38816	342 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	ANS1	P38832	159 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	YHR210C	P38893	341 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	KRE29	P40026	464 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	RRG9	P40156	214 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	SPG5	P42933	373 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	JHD2	P47156	728 aa	Predicted RBP	4.14	□□□□□ -1.75
NMD3	YHR170W	NUP57	P48837	541 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	IMD4	P50094	524 aa	Known RBP	4.14	□□□□□ -1.75
NMD3	YHR170W	MPC1	P53157	130 aa	Known RBP	4.14	□□□□□ -1.75
NMD3	YHR170W	ERG13	P54839	491 aa	Known RBP	4.14	□□□□□ -1.75
NMD3	YHR170W	ABZ2	Q03266	374 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	RRN11	Q04712	507 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	YPR174C	Q06616	221 aa	Predicted RBP	4.14	□□□□□ -1.75
NMD3	YHR170W	MED11	Q99278	115 aa		4.14	□□□□□ -1.75
NMD3	YHR170W	RPL6B	P05739	176 aa	Known RBP	4.13	□□□□□ -1.75
NMD3	YHR170W	CAR2	P07991	424 aa	Known RBP	4.13	□□□□□ -1.75
NMD3	YHR170W	MET2	P08465	486 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	RPL3	P14126	387 aa	Known RBP	4.13	□□□□□ -1.75
NMD3	YHR170W	TAL1	P15019	335 aa	Known RBP	4.13	□□□□□ -1.75
NMD3	YHR170W	BUD5	P25300	642 aa	Predicted RBP	4.13	□□□□□ -1.75
NMD3	YHR170W	YUH1	P35127	236 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	ELF1	P36053	145 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	YKR015C	P36111	568 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	VPS51	P36116	164 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	RTC2	P38279	296 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	IPT1	P38954	527 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	RCY1	P39531	840 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	YNL208W	P40159	199 aa	Known RBP	4.13	□□□□□ -1.75
NMD3	YHR170W	PKP1	P40530	394 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	RPN14	P53196	417 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	YGR168C	P53293	376 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	YGR266W	P53326	701 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	COG5	P53951	403 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	RPL6A	Q02326	176 aa	Known RBP	4.13	□□□□□ -1.75
NMD3	YHR170W	MGR3	Q04472	501 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	YPR091C	Q06833	770 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	IES3	Q12345	250 aa		4.13	□□□□□ -1.75
NMD3	YHR170W	YOL163W	P0CF20	169 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	BAR1	P12630	587 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	DPB2	P24482	689 aa	Predicted RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	STP22	P25604	385 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	RPS5	P26783	225 aa	Known RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	ITR2	P30606	609 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	RIX1	P38883	763 aa	Predicted RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	ALB1	P47019	175 aa	Predicted RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	EFM3	P47163	339 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	VPS73	P53142	486 aa	Known RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	YGR054W	P53235	642 aa	Known RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	MPA43	P53583	542 aa	Predicted RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	DBP6	P53734	629 aa	Known RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	COS1	P53822	381 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	PDR16	P53860	351 aa	Known RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	RHO5	P53879	331 aa	Known RBP	4.12	□□□□□ -1.75
NMD3	YHR170W	TIM44	Q01852	431 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	KAP120	Q02932	1032 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	SNZ1	Q03148	297 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	SMA2	Q04658	369 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	ARR3	Q06598	404 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	CRT10	Q08226	957 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	YOR365C	Q08844	703 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	YDL211C	Q12121	372 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
NMD3	YHR170W	SIA1	Q12212	622 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	TRM10	Q12400	293 aa		4.12	□□□□□ -1.75
NMD3	YHR170W	YOL162W	P0CF19	215 aa		4.11	□□□□□ -1.75
NMD3	YHR170W	RPL20A	P0CX23	172 aa	Known RBP	4.11	□□□□□ -1.75
NMD3	YHR170W	RPL20B	P0CX24	172 aa	Predicted RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms