RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W HOP09932 586 aa2.3□□□□□ -2.04
TRA1YHR099W OSM1P21375 501 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W BCK2P33306 851 aa2.3□□□□□ -2.04
TRA1YHR099W YHR112CP38716 378 aa2.3□□□□□ -2.04
TRA1YHR099W ICE2P40499 491 aa2.3□□□□□ -2.04
TRA1YHR099W HIS6P40545 261 aa2.3□□□□□ -2.04
TRA1YHR099W NIT2P47016 307 aa2.3□□□□□ -2.04
TRA1YHR099W YJR011CP47086 261 aaPredicted RBP2.3□□□□□ -2.04
TRA1YHR099W HNT2P49775 206 aa2.3□□□□□ -2.04
TRA1YHR099W ERV29P53337 310 aa2.3□□□□□ -2.04
TRA1YHR099W SDH1Q00711 640 aa2.3□□□□□ -2.04
TRA1YHR099W SNZ1Q03148 297 aa2.3□□□□□ -2.04
TRA1YHR099W ECM7Q06200 448 aa2.3□□□□□ -2.04
TRA1YHR099W GEP3Q08622 556 aa2.3□□□□□ -2.04
TRA1YHR099W YDR018CQ12185 396 aa2.3□□□□□ -2.04
TRA1YHR099W SME1Q12330 94 aaPredicted RBP2.3□□□□□ -2.04
TRA1YHR099W Q0010Q9ZZX9 128 aa2.3□□□□□ -2.04
TRA1YHR099W GDH1P07262 454 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W RPS4AP0CX35 261 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W RPS4BP0CX36 261 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W SEC59P20048 519 aa2.3□□□□□ -2.04
TRA1YHR099W RRT12P25381 491 aa2.3□□□□□ -2.04
TRA1YHR099W ETR1P38071 380 aa2.3□□□□□ -2.04
TRA1YHR099W HSP10P38910 106 aa2.3□□□□□ -2.04
TRA1YHR099W BUD13P46947 266 aaPredicted RBP2.3□□□□□ -2.04
TRA1YHR099W FRE4P53746 719 aa2.3□□□□□ -2.04
TRA1YHR099W CRR1Q05790 422 aa2.3□□□□□ -2.04
TRA1YHR099W FCY1Q12178 158 aa2.3□□□□□ -2.04
TRA1YHR099W PHO5P00635 467 aa2.3□□□□□ -2.04
TRA1YHR099W HSP12P22943 109 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W FPS1P23900 669 aa2.3□□□□□ -2.04
TRA1YHR099W GAR1P28007 205 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W ASH1P34233 588 aa2.3□□□□□ -2.04
TRA1YHR099W YKL071WP36086 256 aa2.3□□□□□ -2.04
TRA1YHR099W APN2P38207 520 aa2.3□□□□□ -2.04
TRA1YHR099W PHO88P38264 188 aaPredicted RBP2.3□□□□□ -2.04
TRA1YHR099W YPC1P38298 316 aa2.3□□□□□ -2.04
TRA1YHR099W YHR138CP38841 114 aaPredicted RBP2.3□□□□□ -2.04
TRA1YHR099W AIM46P38885 310 aa2.3□□□□□ -2.04
TRA1YHR099W CHL4P38907 458 aa2.3□□□□□ -2.04
TRA1YHR099W SPC25P40014 221 aa2.3□□□□□ -2.04
TRA1YHR099W FCY21P40039 528 aa2.3□□□□□ -2.04
TRA1YHR099W CYB5P40312 120 aa2.3□□□□□ -2.04
TRA1YHR099W ATF1P40353 525 aa2.3□□□□□ -2.04
TRA1YHR099W YNL115CP53925 644 aa2.3□□□□□ -2.04
TRA1YHR099W YLR046CQ12253 270 aa2.3□□□□□ -2.04
TRA1YHR099W RTN2Q12443 393 aa2.3□□□□□ -2.04
TRA1YHR099W YJR112W-AQ3E743 109 aa2.3□□□□□ -2.04
TRA1YHR099W ODC2Q99297 307 aa2.3□□□□□ -2.04
TRA1YHR099W LDS1P31379 325 aa2.3□□□□□ -2.04
TRA1YHR099W YKL151CP36059 337 aa2.3□□□□□ -2.04
TRA1YHR099W TMN3P40071 706 aa2.3□□□□□ -2.04
TRA1YHR099W GCD14P46959 383 aaPredicted RBP2.3□□□□□ -2.04
TRA1YHR099W TYW3P53177 273 aa2.3□□□□□ -2.04
TRA1YHR099W NUP100Q02629 959 aa2.3□□□□□ -2.04
TRA1YHR099W ARL3Q02804 198 aa2.3□□□□□ -2.04
TRA1YHR099W YDR444WQ04093 687 aa2.3□□□□□ -2.04
TRA1YHR099W DCR2Q05924 578 aa2.3□□□□□ -2.04
TRA1YHR099W YOR012WQ12351 137 aa2.3□□□□□ -2.04
TRA1YHR099W TRM13Q12383 476 aa2.3□□□□□ -2.04
TRA1YHR099W PTP2P29461 750 aa2.3□□□□□ -2.04
TRA1YHR099W UTR4P32626 227 aa2.3□□□□□ -2.04
TRA1YHR099W YKL187CP34231 750 aa2.3□□□□□ -2.04
TRA1YHR099W ZTA1P38230 334 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W EXO5P38289 585 aa2.3□□□□□ -2.04
TRA1YHR099W KSP1P38691 1029 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W ERG10P41338 398 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W GAT1P43574 510 aa2.3□□□□□ -2.04
TRA1YHR099W UBX6P47049 396 aa2.3□□□□□ -2.04
TRA1YHR099W TAM41P53230 385 aa2.3□□□□□ -2.04
TRA1YHR099W YGR066CP53242 292 aa2.3□□□□□ -2.04
TRA1YHR099W ATG4P53867 494 aa2.3□□□□□ -2.04
TRA1YHR099W YPL039WQ03080 316 aa2.3□□□□□ -2.04
TRA1YHR099W INP1Q03694 420 aa2.3□□□□□ -2.04
TRA1YHR099W AGE1Q04412 482 aa2.3□□□□□ -2.04
TRA1YHR099W RFM1Q12192 310 aa2.3□□□□□ -2.04
TRA1YHR099W PET122P10355 254 aa2.3□□□□□ -2.04
TRA1YHR099W CKA2P19454 339 aa2.3□□□□□ -2.04
TRA1YHR099W BET2P20133 325 aa2.3□□□□□ -2.04
TRA1YHR099W CPR3P25719 182 aa2.3□□□□□ -2.04
TRA1YHR099W YPT10P38146 199 aa2.3□□□□□ -2.04
TRA1YHR099W END3P39013 349 aa2.3□□□□□ -2.04
TRA1YHR099W RFC2P40348 353 aa2.3□□□□□ -2.04
TRA1YHR099W RRT5P43607 289 aa2.3□□□□□ -2.04
TRA1YHR099W GWT1P47026 490 aa2.3□□□□□ -2.04
TRA1YHR099W BAT2P47176 376 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W NFI1Q12216 726 aa2.3□□□□□ -2.04
TRA1YHR099W YGK3Q12222 375 aaPredicted RBP2.3□□□□□ -2.04
TRA1YHR099W ILV1P00927 576 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W STE7P06784 515 aa2.3□□□□□ -2.04
TRA1YHR099W RHB1P25378 209 aa2.3□□□□□ -2.04
TRA1YHR099W NDC1P32500 655 aa2.3□□□□□ -2.04
TRA1YHR099W ECM31P38122 312 aa2.3□□□□□ -2.04
TRA1YHR099W SOL3P38858 249 aa2.3□□□□□ -2.04
TRA1YHR099W YHR202WP38887 602 aa2.3□□□□□ -2.04
TRA1YHR099W YER188WP40103 239 aa2.3□□□□□ -2.04
TRA1YHR099W CIN2P46670 268 aa2.3□□□□□ -2.04
TRA1YHR099W YMR090WQ04304 227 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W YOR378WQ08902 515 aa2.3□□□□□ -2.04
TRA1YHR099W ATP5P09457 212 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 120.4 ms