RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C NFT1P0CE68 1218 aa11.53□□□□□ -0.56
SHU1YHL006C CPR2P23285 205 aa11.53□□□□□ -0.56
SHU1YHL006C RPC82P32349 654 aa11.53□□□□□ -0.56
SHU1YHL006C MLH1P38920 769 aa11.53□□□□□ -0.56
SHU1YHL006C MTM1P53320 366 aa11.53□□□□□ -0.56
SHU1YHL006C SKO1Q02100 647 aa11.53□□□□□ -0.56
SHU1YHL006C NUP116Q02630 1113 aa11.53□□□□□ -0.56
SHU1YHL006C ELP6Q04868 273 aa11.53□□□□□ -0.56
SHU1YHL006C FIT3Q08907 204 aa11.53□□□□□ -0.56
SHU1YHL006C OPI3P05375 206 aa11.52□□□□□ -0.57
SHU1YHL006C SPC29P33419 253 aa11.52□□□□□ -0.57
SHU1YHL006C YER184CP39961 794 aa11.52□□□□□ -0.57
SHU1YHL006C PIG2P40187 538 aa11.52□□□□□ -0.57
SHU1YHL006C EXG2P52911 562 aa11.52□□□□□ -0.57
SHU1YHL006C CRZ1P53968 678 aa11.52□□□□□ -0.57
SHU1YHL006C YTH1Q06102 208 aaPredicted RBP11.52□□□□□ -0.57
SHU1YHL006C IPK1Q06667 281 aa11.52□□□□□ -0.57
SHU1YHL006C IZH2Q12442 317 aa11.52□□□□□ -0.57
SHU1YHL006C YAK1P14680 807 aa11.51□□□□□ -0.57
SHU1YHL006C GDS1P41913 522 aa11.51□□□□□ -0.57
SHU1YHL006C SAM37P50110 327 aa11.51□□□□□ -0.57
SHU1YHL006C TNA1P53322 534 aa11.51□□□□□ -0.57
SHU1YHL006C RIB3Q99258 208 aa11.51□□□□□ -0.57
SHU1YHL006C DAL80P26343 269 aa11.5□□□□□ -0.57
SHU1YHL006C CHL4P38907 458 aa11.5□□□□□ -0.57
SHU1YHL006C THO1P40040 218 aaKnown RBP11.5□□□□□ -0.57
SHU1YHL006C SSY5P47002 699 aa11.5□□□□□ -0.57
SHU1YHL006C MNT4P53745 580 aa11.5□□□□□ -0.57
SHU1YHL006C TAZ1Q06510 381 aa11.5□□□□□ -0.57
SHU1YHL006C ERG4P25340 473 aa11.49□□□□□ -0.57
SHU1YHL006C POL4P25615 582 aa11.49□□□□□ -0.57
SHU1YHL006C AMN1P38285 549 aaPredicted RBP11.49□□□□□ -0.57
SHU1YHL006C ECM14P38836 430 aa11.49□□□□□ -0.57
SHU1YHL006C SED1Q01589 338 aa11.49□□□□□ -0.57
SHU1YHL006C OST6Q03723 332 aa11.49□□□□□ -0.57
SHU1YHL006C YDR387CQ04162 555 aa11.49□□□□□ -0.57
SHU1YHL006C MCT1Q12283 360 aa11.49□□□□□ -0.57
SHU1YHL006C FBA1P14540 359 aaKnown RBP11.48□□□□□ -0.57
SHU1YHL006C PCL1P24867 279 aa11.48□□□□□ -0.57
SHU1YHL006C CLB2P24869 491 aa11.48□□□□□ -0.57
SHU1YHL006C YCL002CP25565 263 aa11.48□□□□□ -0.57
SHU1YHL006C RRG9P40156 214 aa11.48□□□□□ -0.57
SHU1YHL006C PFS2P42841 465 aaKnown RBP11.48□□□□□ -0.57
SHU1YHL006C NUP49Q02199 472 aa11.48□□□□□ -0.57
SHU1YHL006C RRP9Q06506 573 aaKnown RBP11.48□□□□□ -0.57
SHU1YHL006C YDL114WQ07530 308 aa11.48□□□□□ -0.57
SHU1YHL006C MCH4Q08268 501 aa11.48□□□□□ -0.57
SHU1YHL006C YOR289WQ12012 251 aaPredicted RBP11.48□□□□□ -0.57
SHU1YHL006C GEP5Q12393 293 aa11.48□□□□□ -0.57
SHU1YHL006C STE50P25344 346 aa11.47□□□□□ -0.57
SHU1YHL006C CLB6P32943 380 aa11.47□□□□□ -0.57
SHU1YHL006C VBA2P38358 474 aaKnown RBP11.47□□□□□ -0.57
SHU1YHL006C BUR6P40096 142 aa11.47□□□□□ -0.57
SHU1YHL006C IRC5P43610 853 aa11.47□□□□□ -0.57
SHU1YHL006C FMP33P46998 180 aa11.47□□□□□ -0.57
SHU1YHL006C UBC13P52490 153 aa11.47□□□□□ -0.57
SHU1YHL006C PGA1P53896 198 aa11.47□□□□□ -0.57
SHU1YHL006C PET191Q02772 108 aa11.47□□□□□ -0.57
SHU1YHL006C MRPL51Q06090 140 aaPredicted RBP11.47□□□□□ -0.57
SHU1YHL006C THI72Q08579 599 aa11.47□□□□□ -0.57
SHU1YHL006C YKL107WP34251 309 aa11.46□□□□□ -0.57
SHU1YHL006C AST1P35183 429 aa11.46□□□□□ -0.57
SHU1YHL006C QDR1P40475 563 aa11.46□□□□□ -0.57
SHU1YHL006C YIL029CP40538 142 aa11.46□□□□□ -0.57
SHU1YHL006C YPL077CQ02831 240 aa11.46□□□□□ -0.57
SHU1YHL006C LOT6Q07923 191 aa11.46□□□□□ -0.57
SHU1YHL006C SRL2Q12020 392 aa11.46□□□□□ -0.57
SHU1YHL006C SPO24Q3E752 67 aa11.46□□□□□ -0.57
SHU1YHL006C MSW1P04803 379 aa11.45□□□□□ -0.58
SHU1YHL006C YME2P32843 850 aa11.45□□□□□ -0.58
SHU1YHL006C PEP12P32854 288 aa11.45□□□□□ -0.58
SHU1YHL006C SPT10P35208 640 aa11.45□□□□□ -0.58
SHU1YHL006C SLZ1P40167 298 aa11.45□□□□□ -0.58
SHU1YHL006C SPC19Q03954 165 aa11.45□□□□□ -0.58
SHU1YHL006C SMP3Q04174 516 aa11.45□□□□□ -0.58
SHU1YHL006C GAT3Q07928 141 aa11.45□□□□□ -0.58
SHU1YHL006C TY1A-BLQ12266 440 aa11.45□□□□□ -0.58
SHU1YHL006C TPK3P05986 398 aa11.44□□□□□ -0.58
SHU1YHL006C STE18P18852 110 aa11.44□□□□□ -0.58
SHU1YHL006C RMD9P53140 646 aaKnown RBP11.44□□□□□ -0.58
SHU1YHL006C ERP6P53198 216 aa11.44□□□□□ -0.58
SHU1YHL006C ASI3P53983 676 aa11.44□□□□□ -0.58
SHU1YHL006C RPS13P05756 151 aaKnown RBP11.43□□□□□ -0.58
SHU1YHL006C KRR1P25586 316 aaPredicted RBP11.43□□□□□ -0.58
SHU1YHL006C SLM4P38247 162 aa11.43□□□□□ -0.58
SHU1YHL006C PHO90P39535 881 aa11.43□□□□□ -0.58
SHU1YHL006C SLS1P42900 643 aa11.43□□□□□ -0.58
SHU1YHL006C SFH5P47008 294 aa11.43□□□□□ -0.58
SHU1YHL006C YIP5P53108 310 aa11.43□□□□□ -0.58
SHU1YHL006C YPQ2Q06328 317 aa11.43□□□□□ -0.58
SHU1YHL006C MLC2Q06580 163 aa11.43□□□□□ -0.58
SHU1YHL006C SYC1Q08553 188 aaPredicted RBP11.43□□□□□ -0.58
SHU1YHL006C YOR238WQ08634 303 aa11.43□□□□□ -0.58
SHU1YHL006C ACF2Q12168 779 aa11.43□□□□□ -0.58
SHU1YHL006C SAM35P14693 329 aa11.42□□□□□ -0.58
SHU1YHL006C PHO80P20052 293 aa11.42□□□□□ -0.58
SHU1YHL006C OAC1P32332 324 aa11.42□□□□□ -0.58
SHU1YHL006C YBR096WP38256 230 aa11.42□□□□□ -0.58
SHU1YHL006C YRB2P40517 327 aa11.42□□□□□ -0.58
SHU1YHL006C HIS6P40545 261 aa11.42□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms