RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A YOR292CQ08743 309 aa0.05□□□□□ -2.4
SDH6YDR379C-A RRG1Q12167 365 aaPredicted RBP0.05□□□□□ -2.4
SDH6YDR379C-A AIM45Q12480 344 aaKnown RBP0.05□□□□□ -2.4
SDH6YDR379C-A RAD1P06777 1100 aa0.04□□□□□ -2.4
SDH6YDR379C-A RAD10P06838 210 aa0.04□□□□□ -2.4
SDH6YDR379C-A FUR1P18562 216 aaKnown RBP0.04□□□□□ -2.4
SDH6YDR379C-A CKI1P20485 582 aa0.04□□□□□ -2.4
SDH6YDR379C-A UTR1P21373 530 aa0.04□□□□□ -2.4
SDH6YDR379C-A RPC53P25441 422 aa0.04□□□□□ -2.4
SDH6YDR379C-A MXR2P25566 168 aa0.04□□□□□ -2.4
SDH6YDR379C-A PUP2P32379 260 aa0.04□□□□□ -2.4
SDH6YDR379C-A KRE6P32486 720 aa0.04□□□□□ -2.4
SDH6YDR379C-A PET8P38921 284 aa0.04□□□□□ -2.4
SDH6YDR379C-A YDR089WP38966 869 aa0.04□□□□□ -2.4
SDH6YDR379C-A SUR2P38992 349 aa0.04□□□□□ -2.4
SDH6YDR379C-A AVT6P40074 448 aa0.04□□□□□ -2.4
SDH6YDR379C-A TIF34P40217 347 aaKnown RBP0.04□□□□□ -2.4
SDH6YDR379C-A YFL064CP43540 174 aa0.04□□□□□ -2.4
SDH6YDR379C-A BUD27P43573 796 aaKnown RBP RIP-Chip data0.04□□□□□ -2.4not detected
SDH6YDR379C-A CIS3P47001 227 aa0.04□□□□□ -2.4
SDH6YDR379C-A YJL118WP47022 219 aa0.04□□□□□ -2.4
SDH6YDR379C-A CAB5Q03941 241 aa0.04□□□□□ -2.4
SDH6YDR379C-A YDL144CQ07589 356 aa0.04□□□□□ -2.4
SDH6YDR379C-A ATG5Q12380 294 aa0.04□□□□□ -2.4
SDH6YDR379C-A SFG1Q12507 346 aa0.04□□□□□ -2.4
SDH6YDR379C-A CYR1P08678 2026 aaKnown RBP0.03□□□□□ -2.4
SDH6YDR379C-A PUT1P09368 476 aa0.03□□□□□ -2.4
SDH6YDR379C-A RPL1AP0CX43 217 aaKnown RBP0.03□□□□□ -2.4
SDH6YDR379C-A RPL1BP0CX44 217 aaKnown RBP0.03□□□□□ -2.4
SDH6YDR379C-A SPS100P13130 326 aa0.03□□□□□ -2.4
SDH6YDR379C-A FPR1P20081 114 aaKnown RBP0.03□□□□□ -2.4
SDH6YDR379C-A YGL010WP25338 174 aa0.03□□□□□ -2.4
SDH6YDR379C-A RPL16BP26785 198 aaKnown RBP0.03□□□□□ -2.4
SDH6YDR379C-A CAT2P32796 670 aaKnown RBP0.03□□□□□ -2.4
SDH6YDR379C-A KDX1P36005 433 aa0.03□□□□□ -2.4
SDH6YDR379C-A GPX1P36014 167 aa0.03□□□□□ -2.4
SDH6YDR379C-A IML3P38265 245 aa0.03□□□□□ -2.4
SDH6YDR379C-A PEX32P38292 413 aa0.03□□□□□ -2.4
SDH6YDR379C-A YBR220CP38318 560 aa0.03□□□□□ -2.4
SDH6YDR379C-A GLE2P40066 365 aa0.03□□□□□ -2.4
SDH6YDR379C-A YIL012WP40551 113 aa0.03□□□□□ -2.4
SDH6YDR379C-A YHC3P47040 408 aa0.03□□□□□ -2.4
SDH6YDR379C-A SRB7P47822 140 aa0.03□□□□□ -2.4
SDH6YDR379C-A YGL114WP53134 725 aa0.03□□□□□ -2.4
SDH6YDR379C-A COG7P53195 279 aa0.03□□□□□ -2.4
SDH6YDR379C-A STE23Q06010 1027 aa0.03□□□□□ -2.4
SDH6YDR379C-A YDL121CQ07541 149 aa0.03□□□□□ -2.4
SDH6YDR379C-A YLR012CQ07927 99 aa0.03□□□□□ -2.4
SDH6YDR379C-A GPM3Q12326 303 aa0.03□□□□□ -2.4
SDH6YDR379C-A NUP157P40064 1391 aaKnown RBP0.03□□□□□ -2.4
SDH6YDR379C-A PAN1P32521 1480 aa0.03□□□□□ -2.41
SDH6YDR379C-A OSM1P21375 501 aaKnown RBP0.02□□□□□ -2.41
SDH6YDR379C-A TOM40P23644 387 aaKnown RBP0.02□□□□□ -2.41
SDH6YDR379C-A MEI5P32489 222 aa0.02□□□□□ -2.41
SDH6YDR379C-A SCM4P32564 187 aa0.02□□□□□ -2.41
SDH6YDR379C-A YHR122WP38829 231 aa0.02□□□□□ -2.41
SDH6YDR379C-A SHC1P39000 512 aa0.02□□□□□ -2.41
SDH6YDR379C-A YMR134WP40207 237 aa0.02□□□□□ -2.41
SDH6YDR379C-A RPL37AP49166 88 aaKnown RBP0.02□□□□□ -2.41
SDH6YDR379C-A PRP24P49960 444 aaKnown RBP0.02□□□□□ -2.41
SDH6YDR379C-A TPN1P53099 579 aa0.02□□□□□ -2.41
SDH6YDR379C-A YFH1Q07540 174 aa0.02□□□□□ -2.41
SDH6YDR379C-A YLL007CQ07799 665 aa0.02□□□□□ -2.41
SDH6YDR379C-A YPL278CQ08990 100 aa0.02□□□□□ -2.41
SDH6YDR379C-A GLE1Q12315 538 aa0.02□□□□□ -2.41
SDH6YDR379C-A DCN1Q12395 269 aa0.02□□□□□ -2.41
SDH6YDR379C-A NOT5Q12514 560 aaPredicted RBP0.02□□□□□ -2.41
SDH6YDR379C-A ISD11Q6Q560 94 aa0.02□□□□□ -2.41
SDH6YDR379C-A LAG2Q92325 660 aa0.02□□□□□ -2.41
SDH6YDR379C-A MAS1P10507 462 aa0.01□□□□□ -2.41
SDH6YDR379C-A THR4P16120 514 aaKnown RBP0.01□□□□□ -2.41
SDH6YDR379C-A HXT2P23585 541 aa0.01□□□□□ -2.41
SDH6YDR379C-A IFM1P25038 676 aa0.01□□□□□ -2.41
SDH6YDR379C-A RBK1P25332 333 aa0.01□□□□□ -2.41
SDH6YDR379C-A YCR025CP25352 136 aa0.01□□□□□ -2.41
SDH6YDR379C-A IMP1P28627 190 aa0.01□□□□□ -2.41
SDH6YDR379C-A BMH1P29311 267 aaKnown RBP0.01□□□□□ -2.41
SDH6YDR379C-A HMX1P32339 317 aa0.01□□□□□ -2.41
SDH6YDR379C-A MRPL3P36516 390 aa0.01□□□□□ -2.41
SDH6YDR379C-A CAJ1P39101 391 aa0.01□□□□□ -2.41
SDH6YDR379C-A SOP4P39543 234 aaPredicted RBP0.01□□□□□ -2.41
SDH6YDR379C-A MLC1P53141 149 aa0.01□□□□□ -2.41
SDH6YDR379C-A SWT21P53873 357 aaPredicted RBP0.01□□□□□ -2.41
SDH6YDR379C-A YMR114CQ04471 368 aaKnown RBP0.01□□□□□ -2.41
SDH6YDR379C-A SPE3Q12074 293 aaKnown RBP0.01□□□□□ -2.41
SDH6YDR379C-A YEL009C-AA0A023PZF2 135 aa0□□□□□ -2.41
SDH6YDR379C-A RAS2P01120 322 aaKnown RBP0□□□□□ -2.41
SDH6YDR379C-A VAR1P02381 398 aa0□□□□□ -2.41
SDH6YDR379C-A HSP82P02829 709 aaKnown RBP0□□□□□ -2.41
SDH6YDR379C-A RPL2AP0CX45 254 aaKnown RBP0□□□□□ -2.41
SDH6YDR379C-A RPL2BP0CX46 254 aaKnown RBP0□□□□□ -2.41
SDH6YDR379C-A FBA1P14540 359 aaKnown RBP0□□□□□ -2.41
SDH6YDR379C-A ERD1P16151 362 aa0□□□□□ -2.41
SDH6YDR379C-A TPO5P36029 618 aa0□□□□□ -2.41
SDH6YDR379C-A FKS1P38631 1876 aaKnown RBP0□□□□□ -2.41
SDH6YDR379C-A SPT8P38915 602 aa0□□□□□ -2.41
SDH6YDR379C-A YHB1P39676 399 aaKnown RBP0□□□□□ -2.41
SDH6YDR379C-A KRE29P40026 464 aa0□□□□□ -2.41
SDH6YDR379C-A HUA1P40325 198 aa0□□□□□ -2.41
SDH6YDR379C-A YIL089WP40500 205 aa0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms