RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C YLR283WQ05867 314 aa2.84□□□□□ -1.95
RRP42YDL111C BSC6Q08280 497 aa2.84□□□□□ -1.95
RRP42YDL111C MRP1P10662 321 aaKnown RBP2.83□□□□□ -1.96
RRP42YDL111C YKL187CP34231 750 aa2.83□□□□□ -1.96
RRP42YDL111C MRPL10P36520 322 aa2.83□□□□□ -1.96
RRP42YDL111C DED81P38707 554 aaKnown RBP2.83□□□□□ -1.96
RRP42YDL111C TCD1P38756 429 aa2.83□□□□□ -1.96
RRP42YDL111C TIM17P39515 158 aa2.83□□□□□ -1.96
RRP42YDL111C YER085CP40058 173 aa2.83□□□□□ -1.96
RRP42YDL111C SDS23P53172 527 aa2.83□□□□□ -1.96
RRP42YDL111C CDH1P53197 566 aa2.83□□□□□ -1.96
RRP42YDL111C TIM21P53220 239 aa2.83□□□□□ -1.96
RRP42YDL111C TPC1P53257 314 aa2.83□□□□□ -1.96
RRP42YDL111C MRPL50P53724 139 aa2.83□□□□□ -1.96
RRP42YDL111C MNT4P53745 580 aa2.83□□□□□ -1.96
RRP42YDL111C RNH201P53942 307 aa2.83□□□□□ -1.96
RRP42YDL111C TRM44Q02648 567 aaKnown RBP2.83□□□□□ -1.96
RRP42YDL111C SDO1Q07953 250 aaKnown RBP2.83□□□□□ -1.96
RRP42YDL111C WTM1Q12363 437 aaKnown RBP2.83□□□□□ -1.96
RRP42YDL111C ATG31Q12421 196 aa2.83□□□□□ -1.96
RRP42YDL111C LAG2Q92325 660 aa2.83□□□□□ -1.96
RRP42YDL111C BI3Q9ZZW7 517 aa2.83□□□□□ -1.96
RRP42YDL111C RPB4P20433 221 aaPredicted RBP2.82□□□□□ -1.96
RRP42YDL111C ISY1P21374 235 aaPredicted RBP2.82□□□□□ -1.96
RRP42YDL111C CMK2P22517 447 aa2.82□□□□□ -1.96
RRP42YDL111C MRPL6P32904 214 aa2.82□□□□□ -1.96
RRP42YDL111C YBR241CP38142 488 aa2.82□□□□□ -1.96
RRP42YDL111C PFS1P38872 237 aa2.82□□□□□ -1.96
RRP42YDL111C PET8P38921 284 aa2.82□□□□□ -1.96
RRP42YDL111C SHC1P39000 512 aa2.82□□□□□ -1.96
RRP42YDL111C NRM1P53718 249 aa2.82□□□□□ -1.96
RRP42YDL111C KTR6P54070 446 aa2.82□□□□□ -1.96
RRP42YDL111C GMC1Q04399 608 aa2.82□□□□□ -1.96
RRP42YDL111C PAM18Q07914 168 aa2.82□□□□□ -1.96
RRP42YDL111C HRT3Q12347 344 aa2.82□□□□□ -1.96
RRP42YDL111C TFC7Q12415 435 aa2.82□□□□□ -1.96
RRP42YDL111C YBL111CQ3E7Y5 667 aa2.82□□□□□ -1.96
RRP42YDL111C BGL2P15703 313 aaKnown RBP2.81□□□□□ -1.96
RRP42YDL111C MRPL20P22354 195 aaPredicted RBP2.81□□□□□ -1.96
RRP42YDL111C YCR016WP25617 290 aaKnown RBP2.81□□□□□ -1.96
RRP42YDL111C SRB4P32569 687 aa2.81□□□□□ -1.96
RRP42YDL111C SUA5P32579 426 aa2.81□□□□□ -1.96
RRP42YDL111C PRS1P32895 427 aaKnown RBP2.81□□□□□ -1.96
RRP42YDL111C SPT4P32914 102 aaPredicted RBP2.81□□□□□ -1.96
RRP42YDL111C BMH2P34730 273 aaKnown RBP2.81□□□□□ -1.96
RRP42YDL111C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
RRP42YDL111C BIG1P38813 335 aa2.81□□□□□ -1.96
RRP42YDL111C RTR1P40084 226 aaPredicted RBP2.81□□□□□ -1.96
RRP42YDL111C IGD1P43598 195 aa2.81□□□□□ -1.96
RRP42YDL111C YNR066CP53752 436 aa2.81□□□□□ -1.96
RRP42YDL111C ADD37Q03233 198 aa2.81□□□□□ -1.96
RRP42YDL111C OST6Q03723 332 aa2.81□□□□□ -1.96
RRP42YDL111C KRE28Q04431 385 aa2.81□□□□□ -1.96
RRP42YDL111C LIP2Q06005 328 aa2.81□□□□□ -1.96
RRP42YDL111C PEX30Q06169 523 aa2.81□□□□□ -1.96
RRP42YDL111C VIK1Q12045 647 aa2.81□□□□□ -1.96
RRP42YDL111C RPL21BQ12672 160 aaKnown RBP2.81□□□□□ -1.96
RRP42YDL111C AEP1P32493 518 aa2.8□□□□□ -1.96
RRP42YDL111C CYM1P32898 989 aa2.8□□□□□ -1.96
RRP42YDL111C MSN4P33749 630 aa2.8□□□□□ -1.96
RRP42YDL111C SWD3P38123 315 aa2.8□□□□□ -1.96
RRP42YDL111C MRX3P38172 270 aa2.8□□□□□ -1.96
RRP42YDL111C PRS2P38620 318 aaKnown RBP2.8□□□□□ -1.96
RRP42YDL111C WSC4P38739 605 aa2.8□□□□□ -1.96
RRP42YDL111C VAB2P40003 282 aa2.8□□□□□ -1.96
RRP42YDL111C STB1P42845 420 aa2.8□□□□□ -1.96
RRP42YDL111C OTU1P43558 301 aa2.8□□□□□ -1.96
RRP42YDL111C ASG7P46993 209 aa2.8□□□□□ -1.96
RRP42YDL111C IBA57P47158 497 aa2.8□□□□□ -1.96
RRP42YDL111C TPN1P53099 579 aa2.8□□□□□ -1.96
RRP42YDL111C TPS1Q00764 495 aaKnown RBP2.8□□□□□ -1.96
RRP42YDL111C TAF9Q05027 157 aa2.8□□□□□ -1.96
RRP42YDL111C DPP1Q05521 289 aa2.8□□□□□ -1.96
RRP42YDL111C SFH1Q06168 426 aa2.8□□□□□ -1.96
RRP42YDL111C TAZ1Q06510 381 aa2.8□□□□□ -1.96
RRP42YDL111C CSM4Q08955 156 aa2.8□□□□□ -1.96
RRP42YDL111C MMT2Q08970 484 aa2.8□□□□□ -1.96
RRP42YDL111C PER33Q12144 273 aa2.8□□□□□ -1.96
RRP42YDL111C MSH5Q12175 901 aa2.8□□□□□ -1.96
RRP42YDL111C YOR029WQ12243 111 aa2.8□□□□□ -1.96
RRP42YDL111C SME1Q12330 94 aaPredicted RBP2.8□□□□□ -1.96
RRP42YDL111C CDC42P19073 191 aa2.79□□□□□ -1.96
RRP42YDL111C POF1P25576 258 aa2.79□□□□□ -1.96
RRP42YDL111C KRE6P32486 720 aa2.79□□□□□ -1.96
RRP42YDL111C YKT6P36015 200 aaKnown RBP2.79□□□□□ -1.96
RRP42YDL111C GPI18P38211 433 aa2.79□□□□□ -1.96
RRP42YDL111C ALD5P40047 520 aaKnown RBP2.79□□□□□ -1.96
RRP42YDL111C MSS2P40990 351 aa2.79□□□□□ -1.96
RRP42YDL111C RPL10P41805 221 aaKnown RBP2.79□□□□□ -1.96
RRP42YDL111C SDT1P53078 280 aa2.79□□□□□ -1.96
RRP42YDL111C RMI1Q02685 241 aa2.79□□□□□ -1.96
RRP42YDL111C YML018CQ03730 393 aa2.79□□□□□ -1.96
RRP42YDL111C INP2Q03824 705 aa2.79□□□□□ -1.96
RRP42YDL111C YDR115WQ04598 105 aa2.79□□□□□ -1.96
RRP42YDL111C CTR3Q06686 241 aa2.79□□□□□ -1.96
RRP42YDL111C MIM1Q08176 113 aa2.79□□□□□ -1.96
RRP42YDL111C YOR114WQ12219 294 aa2.79□□□□□ -1.96
RRP42YDL111C CFT1Q06632 1357 aaKnown RBP2.78□□□□□ -1.96
RRP42YDL111C TDH2P00358 332 aaKnown RBP2.78□□□□□ -1.96
RRP42YDL111C RPS3P05750 240 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms