RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PPZ2P33329 710 aa5.13□□□□□ -1.59
PDB1YBR221C MRPS5P33759 307 aa5.13□□□□□ -1.59
PDB1YBR221C TCM62P38228 572 aaKnown RBP5.13□□□□□ -1.59
PDB1YBR221C SUL1P38359 859 aa5.13□□□□□ -1.59
PDB1YBR221C CUE1P38428 203 aa5.13□□□□□ -1.59
PDB1YBR221C RRP3P38712 501 aaKnown RBP5.13□□□□□ -1.59
PDB1YBR221C SAS2P40963 338 aa5.13□□□□□ -1.59
PDB1YBR221C RPL10P41805 221 aaKnown RBP5.13□□□□□ -1.59
PDB1YBR221C PMT5P52867 743 aa5.13□□□□□ -1.59
PDB1YBR221C SHY1P53266 389 aa5.13□□□□□ -1.59
PDB1YBR221C COS6P53344 381 aa5.13□□□□□ -1.59
PDB1YBR221C HST3P53687 447 aa5.13□□□□□ -1.59
PDB1YBR221C ABF2Q02486 183 aa5.13□□□□□ -1.59
PDB1YBR221C YMR187CQ03236 431 aa5.13□□□□□ -1.59
PDB1YBR221C TMN2Q04562 672 aa5.13□□□□□ -1.59
PDB1YBR221C PBP4Q07362 185 aaKnown RBP5.13□□□□□ -1.59
PDB1YBR221C THP1Q08231 455 aa5.13□□□□□ -1.59
PDB1YBR221C YPL225WQ08971 146 aaKnown RBP5.13□□□□□ -1.59
PDB1YBR221C DAS2Q12084 232 aa5.13□□□□□ -1.59
PDB1YBR221C FCY22Q12119 530 aa5.13□□□□□ -1.59
PDB1YBR221C MYO1P08964 1928 aa5.13□□□□□ -1.59
PDB1YBR221C KIN28P06242 306 aa5.12□□□□□ -1.59
PDB1YBR221C PEP4P07267 405 aaKnown RBP5.12□□□□□ -1.59
PDB1YBR221C CPT1P17898 393 aa5.12□□□□□ -1.59
PDB1YBR221C GAS1P22146 559 aaKnown RBP5.12□□□□□ -1.59
PDB1YBR221C HSP30P25619 332 aa5.12□□□□□ -1.59
PDB1YBR221C SHO1P40073 367 aa5.12□□□□□ -1.59
PDB1YBR221C URM1P40554 99 aaPredicted RBP5.12□□□□□ -1.59
PDB1YBR221C LSB3P43603 459 aaKnown RBP5.12□□□□□ -1.59
PDB1YBR221C NBP35P52920 328 aa5.12□□□□□ -1.59
PDB1YBR221C DIG1Q03063 452 aaKnown RBP5.12□□□□□ -1.59
PDB1YBR221C YMD8Q03697 442 aa5.12□□□□□ -1.59
PDB1YBR221C YDR132CQ03900 495 aa5.12□□□□□ -1.59
PDB1YBR221C YDL242WQ07746 117 aa5.12□□□□□ -1.59
PDB1YBR221C IZH3Q07959 543 aa5.12□□□□□ -1.59
PDB1YBR221C LDS2Q08218 356 aa5.12□□□□□ -1.59
PDB1YBR221C YOL159CQ08300 171 aa5.12□□□□□ -1.59
PDB1YBR221C AKR2Q12013 749 aa5.12□□□□□ -1.59
PDB1YBR221C APC9Q12107 265 aa5.12□□□□□ -1.59
PDB1YBR221C WIP1Q2V2P8 89 aa5.12□□□□□ -1.59
PDB1YBR221C BEM2P39960 2167 aaKnown RBP5.11□□□□□ -1.59
PDB1YBR221C RPL4AP10664 362 aaKnown RBP5.11□□□□□ -1.59
PDB1YBR221C ARF1P11076 181 aaKnown RBP5.11□□□□□ -1.59
PDB1YBR221C AMD1P15274 810 aaKnown RBP5.11□□□□□ -1.59
PDB1YBR221C IDP1P21954 428 aaKnown RBP5.11□□□□□ -1.59
PDB1YBR221C UBC8P28263 218 aa5.11□□□□□ -1.59
PDB1YBR221C MSS1P32559 526 aaPredicted RBP5.11□□□□□ -1.59
PDB1YBR221C GDA1P32621 518 aa5.11□□□□□ -1.59
PDB1YBR221C BNA4P38169 460 aa5.11□□□□□ -1.59
PDB1YBR221C RCK2P38623 610 aa5.11□□□□□ -1.59
PDB1YBR221C JJJ3P47138 172 aa5.11□□□□□ -1.59
PDB1YBR221C RPL4BP49626 362 aaKnown RBP5.11□□□□□ -1.59
PDB1YBR221C MRPL22P53881 309 aa5.11□□□□□ -1.59
PDB1YBR221C TMA20P89886 181 aaPredicted RBP5.11□□□□□ -1.59
PDB1YBR221C RSM23Q01163 450 aa5.11□□□□□ -1.59
PDB1YBR221C DYN2Q02647 92 aa5.11□□□□□ -1.59
PDB1YBR221C YPL077CQ02831 240 aa5.11□□□□□ -1.59
PDB1YBR221C MSS11Q03825 758 aa5.11□□□□□ -1.59
PDB1YBR221C CAC2Q04199 468 aa5.11□□□□□ -1.59
PDB1YBR221C DLT1Q04216 342 aa5.11□□□□□ -1.59
PDB1YBR221C HSP31Q04432 237 aa5.11□□□□□ -1.59
PDB1YBR221C YMR114CQ04471 368 aaKnown RBP5.11□□□□□ -1.59
PDB1YBR221C MRPL51Q06090 140 aaPredicted RBP5.11□□□□□ -1.59
PDB1YBR221C YDL057WQ07379 328 aa5.11□□□□□ -1.59
PDB1YBR221C DTD1Q07648 150 aaKnown RBP5.11□□□□□ -1.59
PDB1YBR221C YLR031WQ07978 186 aa5.11□□□□□ -1.59
PDB1YBR221C YNG1Q08465 219 aa5.11□□□□□ -1.59
PDB1YBR221C TRM13Q12383 476 aa5.11□□□□□ -1.59
PDB1YBR221C ILV1P00927 576 aaKnown RBP5.1□□□□□ -1.59
PDB1YBR221C KIN3P22209 435 aa5.1□□□□□ -1.59
PDB1YBR221C AIM26P32858 118 aa5.1□□□□□ -1.59
PDB1YBR221C MRPL6P32904 214 aa5.1□□□□□ -1.59
PDB1YBR221C SGE1P33335 543 aa5.1□□□□□ -1.59
PDB1YBR221C DHH1P39517 506 aaKnown RBP5.1□□□□□ -1.59
PDB1YBR221C PHO90P39535 881 aa5.1□□□□□ -1.59
PDB1YBR221C BDH2P39713 417 aa5.1□□□□□ -1.59
PDB1YBR221C ISC1P40015 477 aaKnown RBP5.1□□□□□ -1.59
PDB1YBR221C RTS2P40962 232 aa5.1□□□□□ -1.59
PDB1YBR221C PMT6P42934 759 aa5.1□□□□□ -1.59
PDB1YBR221C YJL016WP47072 561 aa5.1□□□□□ -1.59
PDB1YBR221C JHD2P47156 728 aaPredicted RBP5.1□□□□□ -1.59
PDB1YBR221C PHB2P50085 310 aa5.1□□□□□ -1.59
PDB1YBR221C USE1P53146 245 aa5.1□□□□□ -1.59
PDB1YBR221C MMS2P53152 137 aa5.1□□□□□ -1.59
PDB1YBR221C JAC1P53193 184 aa5.1□□□□□ -1.59
PDB1YBR221C CPD1P53314 239 aa5.1□□□□□ -1.59
PDB1YBR221C NRK1P53915 240 aa5.1□□□□□ -1.59
PDB1YBR221C COG5P53951 403 aa5.1□□□□□ -1.59
PDB1YBR221C TIM44Q01852 431 aa5.1□□□□□ -1.59
PDB1YBR221C YPL080CQ02826 108 aa5.1□□□□□ -1.59
PDB1YBR221C SNX41Q04053 625 aa5.1□□□□□ -1.59
PDB1YBR221C SEC13Q04491 297 aaKnown RBP5.1□□□□□ -1.59
PDB1YBR221C ARC18Q05933 178 aaKnown RBP5.1□□□□□ -1.59
PDB1YBR221C RGC1Q06108 1083 aaKnown RBP5.1□□□□□ -1.59
PDB1YBR221C HNT3Q08702 217 aa5.1□□□□□ -1.59
PDB1YBR221C YDR018CQ12185 396 aa5.1□□□□□ -1.59
PDB1YBR221C ADE5,7P07244 802 aaKnown RBP5.09□□□□□ -1.59
PDB1YBR221C CDC10P25342 322 aaKnown RBP5.09□□□□□ -1.59
PDB1YBR221C YCR102CP25608 368 aa5.09□□□□□ -1.59
PDB1YBR221C KAR9P32526 644 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms