RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ZNF302Q9NR11 478 aa5.53□□□□□ -1.52
SYCP1-209ENST00000613524 TUBE1Q9UJT0 475 aa5.53□□□□□ -1.52
SYCP1-209ENST00000613524 GPSM3Q9Y4H4 160 aa5.53□□□□□ -1.52
SYCP1-209ENST00000613524 TRANK1O15050 2925 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 GSTTP1A0A1W2PQM5 241 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 C17orf102A2RUQ5 167 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 NEMFO60524 1076 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 USO1O60763 962 aaKnown RBP5.52□□□□□ -1.53
SYCP1-209ENST00000613524 MMP1P03956 469 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 EDNRBP24530 442 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 SREBF1P36956 1147 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 TERF1P54274 439 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 LRSAM1Q6UWE0 723 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 WASF1Q92558 559 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 DYDC2Q96IM9 177 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 INPP4AQ96PE3 977 aaPredicted RBP5.52□□□□□ -1.53
SYCP1-209ENST00000613524 AGXT2Q9BYV1 514 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 TRIM55Q9BYV6 548 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 TNKS2Q9H2K2 1166 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 ZNF215Q9UL58 517 aaPredicted RBP5.52□□□□□ -1.53
SYCP1-209ENST00000613524 SPATA31C2B4DYI2 1134 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 ARHGAP33O14559 1287 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 FOSP01100 380 aaPredicted RBP5.52□□□□□ -1.53
SYCP1-209ENST00000613524 KLRC1P26715 233 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 TXLNAP40222 546 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 PBX3P40426 434 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 PRKCEQ02156 737 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 COL19A1Q14993 1142 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 GRIK4Q16099 956 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 XKR9Q5GH70 373 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 SPOUT1Q5T280 376 aaKnown RBP5.52□□□□□ -1.53
SYCP1-209ENST00000613524 RHPN2Q8IUC4 686 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 KLHDC9Q8NEP7 349 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 RABGGTAQ92696 567 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 PHF20Q9BVI0 1012 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 TEKT3Q9BXF9 490 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 GBP3Q9H0R5 595 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 SCUBE2Q9NQ36 999 aa5.52□□□□□ -1.53
SYCP1-209ENST00000613524 SYCE3A1L190 88 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 ACPPP15309 386 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 MMP16P51512 607 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 GRIN1Q05586 938 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 FPGSQ05932 587 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 NPY5RQ15761 445 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 TTC38Q5R3I4 469 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 FBXW10Q5XX13 1052 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 VASH1Q7L8A9 365 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 KRT25Q7Z3Z0 450 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 BPHLQ86WA6 291 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 PPTC7Q8NI37 304 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 CCDC74AQ96AQ1 378 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 CEP170P1Q96L14 293 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 ZSCAN31Q96LW9 406 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 CLIC6Q96NY7 704 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 SMAD5Q99717 465 aaKnown RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 KIFC3Q9BVG8 833 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 GPRC5CQ9NQ84 441 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 KANSL3Q9P2N6 904 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 PCDHA12Q9UN75 941 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 PHF24Q9UPV7 400 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 LCTP09848 1927 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 PPFIA4O75335 1185 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 IL2RAP01589 272 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 SYT1P21579 422 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 EIF4BP23588 611 aaKnown RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 MSNP26038 577 aaKnown RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 HSD3B2P26439 372 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 CD52P31358 61 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 SKOR1P84550 965 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 AP3B2Q13367 1082 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 MAP9Q49MG5 647 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 RNF187Q5TA31 235 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 NFRKBQ6P4R8 1299 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 FAM126BQ8IXS8 530 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 DBF4BQ8NFT6 615 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 FBXO18Q8NFZ0 1043 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 ANP32BQ92688 251 aaKnown RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 MAP3K14Q99558 947 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 C16orf70Q9BSU1 422 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 WNT8AQ9H1J5 351 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 C12orf49Q9H741 205 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 SH2B1Q9NRF2 756 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 ERAP1Q9NZ08 941 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 PNMA2Q9UL42 364 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-209ENST00000613524 UBIAD1Q9Y5Z9 338 aa5.51□□□□□ -1.53
SYCP1-209ENST00000613524 A6NJY4 79 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 COL6A1P12109 1028 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 HOXB1P14653 301 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 GATMP50440 423 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 NLRP11P59045 1033 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 DEFB103AP81534 67 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 MIS18BP1Q6P0N0 1132 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 NOSTRINQ8IVI9 506 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 ARNTL2Q8WYA1 636 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 IFT43Q96FT9 208 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 PCYT2Q99447 389 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 LXNQ9BS40 222 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 MTA3Q9BTC8 594 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms