RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SMOC2Q9H3U7 446 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 TBC1D17Q9HA65 648 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 UBN1Q9NPG3 1134 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMAD4-215ENST00000592911 TBC1D13Q9NVG8 400 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 ZDHHC7Q9NXF8 308 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 BARHL2Q9NY43 387 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 PPME1Q9Y570 386 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 ZMYM2Q9UBW7 1377 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 TDRD15B5MCY1 1934 aaKnown RBP9.82□□□□□ -0.84
SMAD4-215ENST00000592911 MYH15Q9Y2K3 1946 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 CLUHO75153 1309 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 ANHXE9PGG2 379 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 SGSM2O43147 1006 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 PRC1O43663 620 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 SOD2P04179 222 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 OATP04181 439 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 IBSPP21815 317 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-215ENST00000592911 KLRC2P26717 231 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 PBX3P40426 434 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 DNM2P50570 870 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 WWC2Q6AWC2 1192 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 KIAA2013Q8IYS2 634 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 SLC44A3Q8N4M1 653 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 C12orf76Q8N812 135 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-215ENST00000592911 CNNM3Q8NE01 707 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 ZNF577Q9BSK1 485 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 RTKNQ9BST9 563 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 IER2Q9BTL4 223 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 IL25Q9H293 177 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 NRDE2Q9H7Z3 1164 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 ARHGEF3Q9NR81 526 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 FAM105AQ9NUU6 356 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 CDH22Q9UJ99 828 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 CHD8Q9HCK8 2581 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 CNTNAP5Q8WYK1 1306 aa9.81□□□□□ -0.84
SMAD4-215ENST00000592911 IGKV6-21A0A0C4DH24 114 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 KRBA1A5PL33 1030 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 SMCO2A6NFE2 343 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 FAM86B1E9PN63 330 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 INPPL1O15357 1258 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 FOXD2O60548 495 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-215ENST00000592911 LRP3O75074 770 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 GLUD1P00367 558 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 ALDH2P05091 517 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 URODP06132 367 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 POU2F2P09086 479 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 CNPP09543 421 aaKnown RBP9.8□□□□□ -0.84
SMAD4-215ENST00000592911 FAM86B2P0C5J1 330 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 CHMLP26374 656 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 CA8P35219 290 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 CLCN3P51790 818 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 JAK3P52333 1124 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 EMP3P54852 163 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 PTH1RQ03431 593 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 PRKCQQ04759 706 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 RNASELQ05823 741 aaKnown RBP9.8□□□□□ -0.84
SMAD4-215ENST00000592911 TTC22Q5TAA0 569 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 TWF2Q6IBS0 349 aaKnown RBP9.8□□□□□ -0.84
SMAD4-215ENST00000592911 RTL10Q7L3V2 364 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 RNF168Q8IYW5 571 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-215ENST00000592911 PJA1Q8NG27 643 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 NLRP7Q8WX94 980 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 SCLT1Q96NL6 688 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 RPS6KC1Q96S38 1066 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 RIT2Q99578 217 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 HINFPQ9BQA5 517 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 MYL10Q9BUA6 226 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 HERC2P3Q9BVR0 1158 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 NIFKQ9BYG3 293 aaKnown RBP9.8□□□□□ -0.84
SMAD4-215ENST00000592911 RXFP1Q9HBX9 757 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 GABBR1Q9UBS5 961 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 RALGAPA1Q6GYQ0 2036 aa9.8□□□□□ -0.84
SMAD4-215ENST00000592911 DOCK6Q96HP0 2047 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 TBC1D4O60343 1298 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 OFD1O75665 1012 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 WEE2P0C1S8 567 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 GNA11P29992 359 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 GBP2P32456 591 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-215ENST00000592911 PFKPQ01813 784 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 TARBP2Q15633 366 aaKnown RBP9.79□□□□□ -0.84
SMAD4-215ENST00000592911 VARS2Q5ST30 1063 aaKnown RBP9.79□□□□□ -0.84
SMAD4-215ENST00000592911 DCLRE1AQ6PJP8 1040 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 MTSS1LQ765P7 747 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 MRPL10Q7Z7H8 261 aaKnown RBP9.79□□□□□ -0.84
SMAD4-215ENST00000592911 TMEM173Q86WV6 379 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-215ENST00000592911 RNF169Q8NCN4 708 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 BICD2Q8TD16 824 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 NELL1Q92832 810 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 FAM193BQ96PV7 902 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-215ENST00000592911 NELL2Q99435 816 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 DDX23Q9BUQ8 820 aaKnown RBP9.79□□□□□ -0.84
SMAD4-215ENST00000592911 BCO2Q9BYV7 579 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 ZMYND12Q9H0C1 365 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 EPC1Q9H2F5 836 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 MAN1C1Q9NR34 630 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 FNIP2Q9P278 1114 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 FAN1Q9Y2M0 1017 aa9.79□□□□□ -0.84
SMAD4-215ENST00000592911 CHD6Q8TD26 2715 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 CCDC196A0A1B0GTZ2 297 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms