RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 SCFD1Q8WVM8 642 aa11.72□□□□□ -0.53
SMAD4-214ENST00000592186 DPF3Q92784 378 aa11.72□□□□□ -0.53
SMAD4-214ENST00000592186 HPS3Q969F9 1004 aa11.72□□□□□ -0.53
SMAD4-214ENST00000592186 MRPL4Q9BYD3 311 aaKnown RBP11.72□□□□□ -0.53
SMAD4-214ENST00000592186 NAT10Q9H0A0 1025 aaKnown RBP11.72□□□□□ -0.53
SMAD4-214ENST00000592186 CCDC113Q9H0I3 377 aa11.72□□□□□ -0.53
SMAD4-214ENST00000592186 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
SMAD4-214ENST00000592186 CHST12Q9NRB3 414 aa11.72□□□□□ -0.53
SMAD4-214ENST00000592186 NR2E3Q9Y5X4 410 aa11.72□□□□□ -0.53
SMAD4-214ENST00000592186 KIAA0100Q14667 2235 aaKnown RBP11.72□□□□□ -0.53
SMAD4-214ENST00000592186 ARID2Q68CP9 1835 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 PRKCBP05771 671 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 PFKMP08237 780 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 MYBP10242 640 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 PRCPP42785 496 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 PAK2Q13177 524 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 GSE1Q14687 1217 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 LPIN1Q14693 890 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 STX1AQ16623 288 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.53
SMAD4-214ENST00000592186 ISM2Q6H9L7 571 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 SLFN12LQ6IEE8 588 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 MFSD5Q6N075 450 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 FOXR2Q6PJQ5 311 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 TRAF7Q6Q0C0 670 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 HS2ST1Q7LGA3 356 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 MAP4K3Q8IVH8 894 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 ADSSL1Q8N142 457 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 KIAA0895Q8NCT3 520 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 APBB2Q92870 758 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 CCDC51Q96ER9 411 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 PPP1R16BQ96T49 567 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 KIFC3Q9BVG8 833 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 FTHL17Q9BXU8 183 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 PRDM5Q9NQX1 630 aaPredicted RBP11.71□□□□□ -0.53
SMAD4-214ENST00000592186 ST3GAL5Q9UNP4 418 aa11.71□□□□□ -0.53
SMAD4-214ENST00000592186 ADGRA3Q8IWK6 1321 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 A0A1B0GUA9 196 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 BICDL2A1A5D9 508 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 SYCE3A1L190 88 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 TRIM43BA6NCK2 446 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 PDXKO00764 312 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 HNRNPDLO14979 420 aaKnown RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 KIAA0391O15091 583 aaKnown RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 TOM1L1O75674 476 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 PIGRP01833 764 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 BMP6P22004 513 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 CYP2C18P33260 490 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 LIG4P49917 911 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 CASP5P51878 434 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 NFX1Q12986 1120 aaKnown RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 MYBPC2Q14324 1141 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 TMEM132AQ24JP5 1023 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 TMEM174Q8WUU8 243 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 TMEM40Q8WWA1 233 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 SEPT8Q92599 483 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 TRIM43Q96BQ3 446 aaPredicted RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 BICD1Q96G01 975 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 ZNF668Q96K58 619 aaPredicted RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 PPP1R12CQ9BZL4 782 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 MINDY3Q9H8M7 445 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 PADI3Q9ULW8 664 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 GDAQ9Y2T3 454 aa11.7□□□□□ -0.54
SMAD4-214ENST00000592186 NOC2LQ9Y3T9 749 aaKnown RBP11.7□□□□□ -0.54
SMAD4-214ENST00000592186 CNTNAP2Q9UHC6 1331 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 PPP1R3GB7ZBB8 358 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 N4BP3O15049 544 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 CLDN3O15551 220 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 CALUO43852 315 aaPredicted RBP11.69□□□□□ -0.54
SMAD4-214ENST00000592186 TSPAN1O60635 241 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 CXCL10P02778 98 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 GHRP10912 638 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 SKIP12755 728 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 RPL13P26373 211 aaKnown RBP11.69□□□□□ -0.54
SMAD4-214ENST00000592186 CCL23P55773 120 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 LRRC63Q05C16 580 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 TYRO3Q06418 890 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 KYAT1Q16773 422 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 PLEKHG4Q58EX7 1191 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 ATF7IP2Q5U623 682 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 CENPPQ6IPU0 288 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 NOTUMQ6P988 496 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 TAS1R3Q7RTX0 852 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 C7orf61Q8IZ16 206 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 ACO2Q99798 780 aaKnown RBP11.69□□□□□ -0.54
SMAD4-214ENST00000592186 TSG101Q99816 390 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 ADPGKQ9BRR6 497 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 TCHPQ9BT92 498 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 TRAIPQ9BWF2 469 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 IFIH1Q9BYX4 1025 aaKnown RBP11.69□□□□□ -0.54
SMAD4-214ENST00000592186 WNT8AQ9H1J5 351 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 ERVK-5Q9HDB9 667 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 AGPAT5Q9NUQ2 364 aa11.69□□□□□ -0.54
SMAD4-214ENST00000592186 TYW1Q9NV66 732 aaKnown RBP11.69□□□□□ -0.54
SMAD4-214ENST00000592186 MAPK8IP1Q9UQF2 711 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms