RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 MRPL10Q7Z7H8 261 aaKnown RBP17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 RBM23Q86U06 439 aaKnown RBP17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 SMG8Q8ND04 991 aaKnown RBP17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 SYMPKQ92797 1274 aaKnown RBP17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 SNX21Q969T3 373 aa17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 IFT74Q96LB3 600 aa17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 KIFC3Q9BVG8 833 aa17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 CSRNP2Q9H175 543 aa17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 HES2Q9Y543 173 aa17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 ARID2Q68CP9 1835 aa17.25■□□□□ 0.35
AC009088.3-201ENST00000563605 UNC80Q8N2C7 3258 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 CCDC169A6NNP5 214 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 ZC3H11AO75152 810 aaKnown RBP eCLIP17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 NPTXRO95502 500 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 UBA7P41226 1012 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 ALDH7A1P49419 539 aaKnown RBP17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 AFF1P51825 1210 aaKnown RBP17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 BCAR1P56945 870 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 ERVFC1P60507 584 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 GRIN1Q05586 938 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 RAD51AP2Q09MP3 1159 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 HYAL1Q12794 435 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 RESTQ13127 1097 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 PCBP1Q15365 356 aaKnown RBP eCLIP17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 CABP7Q86V35 215 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 RUSC1Q9BVN2 902 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 NFKBIZQ9BYH8 718 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 RSAD1Q9HA92 442 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 TBC1D13Q9NVG8 400 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 CLDND1Q9NY35 253 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 SPG21Q9NZD8 308 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 PUF60Q9UHX1 559 aaKnown RBP17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 MTMR6Q9Y217 621 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 IPPQ9Y573 584 aa17.24■□□□□ 0.35
AC009088.3-201ENST00000563605 FNDC1Q4ZHG4 1894 aaPredicted RBP17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 TTLL13PA6NNM8 815 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 SFI1A8K8P3 1242 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 H3BQ06 376 aaPredicted RBP17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 STX6O43752 255 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 HIP1RO75146 1068 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 BMP15O95972 392 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 POMCP01189 267 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 BMP1P13497 986 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 MARCKSP29966 332 aaPredicted RBP17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 NAMPTP43490 491 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 KRT17Q04695 432 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 DHX8Q14562 1220 aaKnown RBP17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 PPP2R5AQ15172 486 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 CSPP1Q1MSJ5 1256 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 RINT1Q6NUQ1 792 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 ADGRD2Q7Z7M1 963 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 ZNF280BQ86YH2 543 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 CNNM3Q8NE01 707 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 RASSF8Q8NHQ8 419 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 URGCPQ8TCY9 931 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 KIFAP3Q92845 792 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 C2orf40Q9H1Z8 148 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 FZD8Q9H461 694 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 PRMT7Q9NVM4 692 aaPredicted RBP17.23■□□□□ 0.35
AC009088.3-201ENST00000563605 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 LINC01565O15544 149 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 PRKCBP05771 671 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 AKAP5P24588 427 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 CA8P35219 290 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 NRIP1P48552 1158 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 PEX3P56589 373 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 UBE3AQ05086 875 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 PRPF4BQ13523 1007 aaKnown RBP17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 MAPK6Q16659 721 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 CDCA2Q69YH5 1023 aaPredicted RBP17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 SLC27A1Q6PCB7 646 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 ADAMTS19Q8TE59 1207 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 MRPS27Q92552 414 aaKnown RBP17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 PABPC5Q96DU9 382 aaKnown RBP17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 CCDC51Q96ER9 411 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 NECAB3Q96P71 396 aaPredicted RBP17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 NT5C3AQ9H0P0 336 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 NXF3Q9H4D5 531 aaKnown RBP17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 TLR9Q9NR96 1032 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
AC009088.3-201ENST00000563605 NPHP3-ACAD11A0A0J9YXS1 232 aa17.21■□□□□ 0.35
AC009088.3-201ENST00000563605 A0A1B0GUA9 196 aa17.21■□□□□ 0.35
AC009088.3-201ENST00000563605 PER2O15055 1255 aa17.21■□□□□ 0.35
AC009088.3-201ENST00000563605 DDHD2O94830 711 aa17.21■□□□□ 0.35
AC009088.3-201ENST00000563605 PLA2G4BP0C869 781 aa17.21■□□□□ 0.35
AC009088.3-201ENST00000563605 PPM1AP35813 382 aa17.21■□□□□ 0.35
AC009088.3-201ENST00000563605 PLCB3Q01970 1234 aa17.21■□□□□ 0.35
AC009088.3-201ENST00000563605 CLUL1Q15846 466 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms