RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 CCDC85BQ15834 202 aaPredicted RBP13.36□□□□□ -0.27
USP8-212ENST00000560730 LRRC55Q6ZSA7 311 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 RASSF8Q8NHQ8 419 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 DEPTORQ8TB45 409 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 HELQQ8TDG4 1101 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 PPM1EQ8WY54 764 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 RAD54LQ92698 747 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 IFT74Q96LB3 600 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 PANK2Q9BZ23 570 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 TMEM117Q9H0C3 514 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 CCDC113Q9H0I3 377 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 CWH43Q9H720 699 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 TYW1Q9NV66 732 aaKnown RBP13.36□□□□□ -0.27
USP8-212ENST00000560730 PCDHB2Q9Y5E7 798 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 MTCH2Q9Y6C9 303 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 PLXNA4Q9HCM2 1894 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 BRWD1Q9NSI6 2320 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 CCDC169A6NNP5 214 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 YEATS4O95619 227 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 POU3F3P20264 500 aaPredicted RBP13.35□□□□□ -0.27
USP8-212ENST00000560730 AXLP30530 894 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 NPTX2P47972 431 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 GPM6BQ13491 265 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 PPP2R5AQ15172 486 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 PCBP1Q15365 356 aaKnown RBP eCLIP13.35□□□□□ -0.27
USP8-212ENST00000560730 FAM187BQ17R55 369 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 AGMOQ6ZNB7 445 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 MRPL10Q7Z7H8 261 aaKnown RBP13.35□□□□□ -0.27
USP8-212ENST00000560730 GPBP1Q86WP2 473 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 ZBTB8OSQ8IWT0 167 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 SMG8Q8ND04 991 aaKnown RBP13.35□□□□□ -0.27
USP8-212ENST00000560730 SAMD11Q96NU1 681 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 HES2Q9Y543 173 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 TRIP11Q15643 1979 aa13.35□□□□□ -0.27
USP8-212ENST00000560730 C5orf67F2Z3F1 127 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 H3BNC9 293 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 SLC16A4O15374 487 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 PPP6R2O75170 966 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 PRKCBP05771 671 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 DDIT3P35638 169 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 RAB27AP51159 221 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 NAALADL2Q58DX5 795 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 AXDND1Q5T1B0 1012 aaPredicted RBP13.34□□□□□ -0.27
USP8-212ENST00000560730 NOTUMQ6P988 496 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 TAS1R3Q7RTX0 852 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 MICALL1Q8N3F8 863 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 DRC1Q96MC2 740 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
USP8-212ENST00000560730 PRMT7Q9NVM4 692 aaPredicted RBP13.34□□□□□ -0.27
USP8-212ENST00000560730 A0A1B0GUA9 196 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 GRM6O15303 877 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 HOXA2O43364 376 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 OFD1O75665 1012 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 NPTXRO95502 500 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 RB1P06400 928 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 SKIP12755 728 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 PLS3P13797 630 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
USP8-212ENST00000560730 GIT2Q14161 759 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 MAPK6Q16659 721 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 SPOUT1Q5T280 376 aaKnown RBP13.33□□□□□ -0.28
USP8-212ENST00000560730 NT5DC1Q5TFE4 455 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 RRAGBQ5VZM2 374 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 EEF1DP3Q658K8 133 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 SHC4Q6S5L8 630 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 ABI1Q8IZP0 508 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 LARP4BQ92615 738 aaKnown RBP13.33□□□□□ -0.28
USP8-212ENST00000560730 REEP2Q9BRK0 252 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 TIPINQ9BVW5 301 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 NXF3Q9H4D5 531 aaKnown RBP13.33□□□□□ -0.28
USP8-212ENST00000560730 ALG13Q9NP73 1137 aaKnown RBP13.33□□□□□ -0.28
USP8-212ENST00000560730 KMT5AQ9NQR1 393 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 ARHGAP28Q9P2N2 729 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 CCDC39Q9UFE4 941 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 RCOR1Q9UKL0 485 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 PCDHA7Q9UN72 937 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 IPPQ9Y573 584 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 TDRD15B5MCY1 1934 aaKnown RBP13.33□□□□□ -0.28
USP8-212ENST00000560730 CNTNAP2Q9UHC6 1331 aa13.33□□□□□ -0.28
USP8-212ENST00000560730 K7ERI5 159 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 ACKR2O00590 384 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
USP8-212ENST00000560730 CUTAO60888 179 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 ITGB1P05556 798 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 NCLP19338 710 aaKnown RBP13.32□□□□□ -0.28
USP8-212ENST00000560730 PBX3P40426 434 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 EFNA5P52803 228 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 NCBP1Q09161 790 aaKnown RBP13.32□□□□□ -0.28
USP8-212ENST00000560730 DMP1Q13316 513 aaPredicted RBP13.32□□□□□ -0.28
USP8-212ENST00000560730 PRPF4BQ13523 1007 aaKnown RBP13.32□□□□□ -0.28
USP8-212ENST00000560730 ATL3Q6DD88 541 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 SLC27A1Q6PCB7 646 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 PDILTQ8N807 584 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 KLHL23Q8NBE8 558 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 COLGALT1Q8NBJ5 622 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 CCDC51Q96ER9 411 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
USP8-212ENST00000560730 NTPCRQ9BSD7 190 aaKnown RBP13.32□□□□□ -0.28
USP8-212ENST00000560730 APOL6Q9BWW8 343 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms