RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 WDR6Q9NNW5 1121 aaKnown RBP13.33□□□□□ -0.28
ACTN1-221ENST00000556571 SH3GLB2Q9NR46 395 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 AGPAT5Q9NUQ2 364 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 CNTNAP2Q9UHC6 1331 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 CYP3A7-CYP3A51PA0A087WV96 503 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 CCDC195A0A1B0GUA6 201 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 NRP1O14786 923 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 SOD2P04179 222 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 URODP06132 367 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-221ENST00000556571 ADH1AP07327 375 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 RFX1P22670 979 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 CYP3A7P24462 503 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 GBP2P32456 591 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-221ENST00000556571 NLRP5P59047 1200 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 PSMC5P62195 406 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 NTRK3Q16288 839 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 SRGAP1Q7Z6B7 1085 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 KSR1Q8IVT5 923 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 EXOC8Q8IYI6 725 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 TBCKQ8TEA7 893 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 NXPE3Q969Y0 559 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 RPS6KC1Q96S38 1066 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 SLC26A6Q9BXS9 759 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 IFT122Q9HBG6 1241 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 VPS54Q9P1Q0 977 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 EPS15L1Q9UBC2 864 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 DCHS1Q96JQ0 3298 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 NID2Q14112 1375 aa13.32□□□□□ -0.28
ACTN1-221ENST00000556571 C2CD2LO14523 706 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 TEX28O15482 410 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 NARSO43776 548 aaKnown RBP13.31□□□□□ -0.28
ACTN1-221ENST00000556571 N4BP1O75113 896 aaKnown RBP13.31□□□□□ -0.28
ACTN1-221ENST00000556571 GLUD1P00367 558 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 POMCP01189 267 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 LMNAP02545 664 aaKnown RBP13.31□□□□□ -0.28
ACTN1-221ENST00000556571 CFHP08603 1231 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 CPA1P15085 419 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 IFNAR1P17181 557 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 HOXA11P31270 313 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-221ENST00000556571 AFF1P51825 1210 aaKnown RBP13.31□□□□□ -0.28
ACTN1-221ENST00000556571 AK2P54819 239 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 ANO5Q75V66 913 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 FBXL16Q8N461 479 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 SLC44A3Q8N4M1 653 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 RSAD2Q8WXG1 361 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 HERC2P3Q9BVR0 1158 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 UBN1Q9NPG3 1134 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 COL4A3BPQ9Y5P4 624 aa13.31□□□□□ -0.28
ACTN1-221ENST00000556571 KRBA1A5PL33 1030 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 INPPL1O15357 1258 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 DKC1O60832 514 aaKnown RBP eCLIP13.3□□□□□ -0.28
ACTN1-221ENST00000556571 TDP2O95551 362 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 C1RP00736 705 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 SRFP11831 508 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
ACTN1-221ENST00000556571 GLUD2P49448 558 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 UBXN11Q5T124 520 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 MOXD1Q6UVY6 613 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 ETNPPLQ8TBG4 499 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 HDAC7Q8WUI4 952 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 PRPF31Q8WWY3 499 aaKnown RBP13.3□□□□□ -0.28
ACTN1-221ENST00000556571 RXFP1Q9HBX9 757 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 PCDHA4Q9UN74 947 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 CLUHO75153 1309 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 CEP250Q9BV73 2442 aa13.3□□□□□ -0.28
ACTN1-221ENST00000556571 WDR81Q562E7 1941 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 OTOGLQ3ZCN5 2332 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 SRGAP2CP0DJJ0 459 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 ITGA4P13612 1032 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 OR1G1P47890 313 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 QARSP47897 775 aaKnown RBP13.29□□□□□ -0.28
ACTN1-221ENST00000556571 NPEPPSP55786 919 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 KIAA0319Q5VV43 1072 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 PLA2G4FQ68DD2 849 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 PHLDB3Q6NSJ2 640 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 TAS1R1Q7RTX1 841 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 COLGALT2Q8IYK4 626 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 RNF168Q8IYW5 571 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-221ENST00000556571 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
ACTN1-221ENST00000556571 SMG7Q92540 1137 aaKnown RBP13.29□□□□□ -0.28
ACTN1-221ENST00000556571 KCNB2Q92953 911 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 JAKMIP1Q96N16 626 aaKnown RBP13.29□□□□□ -0.28
ACTN1-221ENST00000556571 MBOAT7Q96N66 472 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 MYADMQ96S97 322 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 PLEKHA4Q9H4M7 779 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 TBC1D17Q9HA65 648 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 MARCH5Q9NX47 278 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.29□□□□□ -0.283e-6■■□□□ 14.5
ACTN1-221ENST00000556571 CA14Q9ULX7 337 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-221ENST00000556571 DENND4AQ7Z401 1863 aa13.29□□□□□ -0.28
ACTN1-221ENST00000556571 NCOR2Q9Y618 2525 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms