RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-230ENST00000552960 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 CLSTN1O94985 981 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 GCFC2P16383 781 aaKnown RBP13.33□□□□□ -0.28
HDAC7-230ENST00000552960 TNFAIP3P21580 790 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 EIF3BP55884 814 aaKnown RBP13.33□□□□□ -0.28
HDAC7-230ENST00000552960 TGFB2P61812 414 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 ARHGEF26Q96DR7 871 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 BHMT2Q9H2M3 363 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 KDM4CQ9H3R0 1056 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.28
HDAC7-230ENST00000552960 DNM3Q9UQ16 869 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 ESYT2A0FGR8 921 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 C5orf60A6NFR6 353 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 CES2O00748 559 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 CALUO43852 315 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-230ENST00000552960 CYP2J2P51589 502 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 JAMLQ86YT9 394 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 C3orf20Q8ND61 904 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 LNX1Q8TBB1 728 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-230ENST00000552960 ATP8B4Q8TF62 1192 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 PRCCQ92733 491 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-230ENST00000552960 THAP2Q9H0W7 228 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 PABPC3Q9H361 631 aaKnown RBP13.33□□□□□ -0.28
HDAC7-230ENST00000552960 MYOZ2Q9NPC6 264 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.33□□□□□ -0.287e-9■■■■■ 30.7
HDAC7-230ENST00000552960 CTTNBP2NLQ9P2B4 639 aa13.33□□□□□ -0.28
HDAC7-230ENST00000552960 TBCAO75347 108 aaKnown RBP13.32□□□□□ -0.28
HDAC7-230ENST00000552960 ENTPD3O75355 529 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 KCNJ1P48048 391 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 KCNJ2P63252 427 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
HDAC7-230ENST00000552960 DCAF12L1Q5VU92 463 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 CIAPIN1Q6FI81 312 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 TRPM8Q7Z2W7 1104 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 GDAP1Q8TB36 358 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 JDP2Q8WYK2 163 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 UBOX5O94941 541 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 ACSL3O95573 720 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 TRIM49P0CI25 452 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 TRIM49CP0CI26 452 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 ORC2Q13416 577 aaPredicted RBP13.32□□□□□ -0.28
HDAC7-230ENST00000552960 EPHA7Q15375 998 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 EDRF1Q3B7T1 1238 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 ZNF746Q6NUN9 644 aaPredicted RBP13.32□□□□□ -0.28
HDAC7-230ENST00000552960 TMEM179Q6ZVK1 233 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 FRMD5Q7Z6J6 570 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 CATSPER3Q86XQ3 398 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 EIF1ADQ8N9N8 165 aaKnown RBP13.32□□□□□ -0.28
HDAC7-230ENST00000552960 HES6Q96HZ4 224 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 PNMA6FA0A0J9YX94 578 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 MGRN1O60291 552 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 PPFIA2O75334 1257 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 ANP32DO95626 131 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 LACTB2Q53H82 288 aaPredicted RBP13.32□□□□□ -0.28
HDAC7-230ENST00000552960 PALB2Q86YC2 1186 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 PIGOQ8TEQ8 1089 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 ALG3Q92685 438 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 TLCD1Q96CP7 247 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 RASAL2Q9UJF2 1139 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 DNAJC12Q9UKB3 198 aa13.32□□□□□ -0.28
HDAC7-230ENST00000552960 ATRNL1Q5VV63 1379 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 RASGRF2O14827 1237 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 ZBTB5O15062 677 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 PAEPP09466 180 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 FERP16591 822 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 RPL13P26373 211 aaKnown RBP13.31□□□□□ -0.28
HDAC7-230ENST00000552960 MARCKSL1P49006 195 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 GIT2Q14161 759 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 MESDQ14696 234 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 LONRF1Q17RB8 773 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 ZC2HC1CQ53FD0 456 aaPredicted RBP13.31□□□□□ -0.28
HDAC7-230ENST00000552960 NUGGCQ68CJ6 796 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 RASGEF1CQ8N431 466 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 FAM151AQ8WW52 585 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 SLC35C1Q96A29 364 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 ZNF317Q96PQ6 595 aaPredicted RBP13.31□□□□□ -0.28
HDAC7-230ENST00000552960 TRIM6Q9C030 488 aaPredicted RBP13.31□□□□□ -0.28
HDAC7-230ENST00000552960 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 BTNL10A8MVZ5 291 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 CHMP2AO43633 222 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 DNAJC8O75937 253 aaPredicted RBP13.31□□□□□ -0.28
HDAC7-230ENST00000552960 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
HDAC7-230ENST00000552960 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
HDAC7-230ENST00000552960 PTENP60484 403 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 RASA3Q14644 834 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 RFFLQ8WZ73 363 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 MKL1Q969V6 931 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 MTRF1LQ9UGC7 380 aaKnown RBP13.31□□□□□ -0.28
HDAC7-230ENST00000552960 STXBP5LQ9Y2K9 1186 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 PCDHA1Q9Y5I3 950 aa13.31□□□□□ -0.28
HDAC7-230ENST00000552960 MYO3BQ8WXR4 1341 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms