RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 LTA4HP09960 611 aaKnown RBP8.13□□□□□ -1.11
LEMD3-206ENST00000545026 IL10RAQ13651 578 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 SEPT2Q15019 361 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 NOMO1Q15155 1222 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 VWA3BQ502W6 1294 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 CNKSR3Q6P9H4 555 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
LEMD3-206ENST00000545026 LARP4Q71RC2 724 aaKnown RBP eCLIP8.13□□□□□ -1.11
LEMD3-206ENST00000545026 OVCH2Q7RTZ1 564 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 IFNL2Q8IZJ0 200 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 UNC5BQ8IZJ1 945 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 PPP1R35Q8TAP8 253 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 HOXB13Q92826 284 aaPredicted RBP8.13□□□□□ -1.11
LEMD3-206ENST00000545026 HDAC10Q969S8 669 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 YTHDC1Q96MU7 727 aaKnown RBP8.13□□□□□ -1.11
LEMD3-206ENST00000545026 PWWP2AQ96N64 755 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 KATNBL1Q9H079 304 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 L2HGDHQ9H9P8 463 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 CHST12Q9NRB3 414 aa8.13□□□□□ -1.11
LEMD3-206ENST00000545026 PLIN1O60240 522 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 KRT1P04264 644 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 PI3P19957 117 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 USP14P54578 494 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 RHBDL3P58872 404 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 CAP1Q01518 475 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 UBE3CQ15386 1083 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 ABHD15Q6UXT9 468 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 CLEC14AQ86T13 490 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 ZNF526Q8TF50 670 aaPredicted RBP8.12□□□□□ -1.11
LEMD3-206ENST00000545026 SLC39A13Q96H72 371 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 DDX21Q9NR30 783 aaKnown RBP eCLIP8.12□□□□□ -1.11
LEMD3-206ENST00000545026 MAN1C1Q9NR34 630 aa8.12□□□□□ -1.11
LEMD3-206ENST00000545026 FAM171A2A8MVW0 826 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 AKR1B10O60218 316 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 TUSC2O75896 110 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 ALDH2P05091 517 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 SESN2P58004 480 aaPredicted RBP8.11□□□□□ -1.11
LEMD3-206ENST00000545026 DSC2Q02487 901 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 PCOLCEQ15113 449 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 C19orf54Q5BKX5 351 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 Q6ZUG5 572 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 TAS1R1Q7RTX1 841 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 DENND1CQ8IV53 801 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 PJA1Q8NG27 643 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.11□□□□□ -1.11
LEMD3-206ENST00000545026 SNX33Q8WV41 574 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 KAT5Q92993 513 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 GFM2Q969S9 779 aaKnown RBP8.11□□□□□ -1.11
LEMD3-206ENST00000545026 AJUBAQ96IF1 538 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 PCDHA13Q9Y5I0 950 aa8.11□□□□□ -1.11
LEMD3-206ENST00000545026 CFAP20Q9Y6A4 193 aaKnown RBP8.11□□□□□ -1.11
LEMD3-206ENST00000545026 SH3D21A4FU49 640 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 ZNF827Q17R98 1081 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 MST1LQ2TV78 715 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 PPP4R4Q6NUP7 873 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 FAM180AQ6UWF9 173 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 Q6ZVL8 140 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 MIGA2Q7L4E1 593 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 REXO1L1PQ8IX06 675 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 RTKN2Q8IZC4 609 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 FAM43AQ8N2R8 423 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 CAMKK1Q8N5S9 505 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 MSL3Q8N5Y2 521 aaKnown RBP8.1□□□□□ -1.11
LEMD3-206ENST00000545026 TTC17Q96AE7 1141 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 FAM84AQ96KN4 292 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 C7orf25Q9BPX7 421 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 TMEM60Q9H2L4 133 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 NTMQ9P121 344 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 PCDHB1Q9Y5F3 818 aa8.1□□□□□ -1.11
LEMD3-206ENST00000545026 C2orf78A6NCI8 922 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 DAPK3O43293 454 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 B3GALT2O43825 422 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 PRAMEF4O60810 478 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 PHF2O75151 1096 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 UBXN7O94888 489 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 ADSLP30566 484 aaPredicted RBP8.09□□□□□ -1.11
LEMD3-206ENST00000545026 SLC6A9P48067 706 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 ADAM15Q13444 863 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 GJC2Q5T442 439 aaPredicted RBP8.09□□□□□ -1.11
LEMD3-206ENST00000545026 SYCP2LQ5T4T6 812 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 ATG14Q6ZNE5 492 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 SRGAP1Q7Z6B7 1085 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 FBXO41Q8TF61 875 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 UIMC1Q96RL1 719 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 LRFN3Q9BTN0 628 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 ZNF700Q9H0M5 742 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 CNOT6Q9ULM6 557 aaKnown RBP8.09□□□□□ -1.11
LEMD3-206ENST00000545026 SIK3Q9Y2K2 1263 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 KCTD3Q9Y597 815 aa8.09□□□□□ -1.11
LEMD3-206ENST00000545026 CTDP1Q9Y5B0 961 aaPredicted RBP8.09□□□□□ -1.11
LEMD3-206ENST00000545026 TPP1O14773 563 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 ZBED1O96006 694 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 HRGP04196 525 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 RHCEP18577 417 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 CSF2RBP32927 897 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 MRE11P49959 708 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 MEOX1P50221 254 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 RHDQ02161 417 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 HDAC1Q13547 482 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms