RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 HOXD13P35453 343 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 TFAMQ00059 246 aaKnown RBP9.39□□□□□ -0.91
SREK1-215ENST00000524111 PPP3CAQ08209 521 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 FOXR1Q6PIV2 292 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 ARHGEF19Q8IW93 802 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 MICALL1Q8N3F8 863 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 NSUN6Q8TEA1 469 aaKnown RBP9.39□□□□□ -0.91
SREK1-215ENST00000524111 SLC5A5Q92911 643 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 RIT2Q99578 217 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 STK33Q9BYT3 514 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 POLR3FQ9H1D9 316 aaPredicted RBP9.39□□□□□ -0.91
SREK1-215ENST00000524111 PCDHB4Q9Y5E5 795 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 E7EVH7 732 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 SGPL1O95470 568 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 IFNB1P01574 187 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
SREK1-215ENST00000524111 MFAP3P55082 362 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 CDK17Q00537 523 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 CALCOCO2Q13137 446 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 TSEN2Q8NCE0 465 aaKnown RBP9.39□□□□□ -0.91
SREK1-215ENST00000524111 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 ARHGEF26Q96DR7 871 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 RNPC3Q96LT9 517 aaKnown RBP9.39□□□□□ -0.91
SREK1-215ENST00000524111 IWS1Q96ST2 819 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 KLHL11Q9NVR0 708 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 RASAL2Q9UJF2 1139 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 MTUS1Q9ULD2 1270 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 DAAM1Q9Y4D1 1078 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 LTBP4Q8N2S1 1624 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 CSDE1O75534 798 aaKnown RBP9.39□□□□□ -0.91
SREK1-215ENST00000524111 IVLP07476 585 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 PLS3P13797 630 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 CNTN2Q02246 1040 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.39□□□□□ -0.91
SREK1-215ENST00000524111 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 TAS1R2Q8TE23 839 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 CPA5Q8WXQ8 436 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 AGPAT1Q99943 283 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 C11orf70Q9BRQ4 267 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 OLFML3Q9NRN5 406 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 ANAPC7Q9UJX3 599 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 ODF2LQ9ULJ1 636 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 MYH15Q9Y2K3 1946 aa9.39□□□□□ -0.91
SREK1-215ENST00000524111 NPTX2P47972 431 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 IFNAR2P48551 515 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 KRT76Q01546 638 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 GUCY1A3Q02108 690 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 PRKCEQ02156 737 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 GRM1Q13255 1194 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 MTM1Q13496 603 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 DCUN1D2Q6PH85 259 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 TMEM270Q6UE05 265 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 IRF2BP2Q7Z5L9 587 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 AGBL3Q8NEM8 1001 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 HNRNPLLQ8WVV9 542 aaKnown RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 CASKIN2Q8WXE0 1202 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 RFFLQ8WZ73 363 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 HAUS1Q96CS2 278 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 ZIM3Q96PE6 472 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 RANBP17Q9H2T7 1088 aaKnown RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 JPH1Q9HDC5 661 aaPredicted RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 PPP1R9AQ9ULJ8 1098 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 A0A1B0GUL6 1792 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 ANKRD63C9JTQ0 380 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 GOLGA8SH3BPF8 625 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 PSAPP07602 524 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 FECHP22830 423 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 TRPC3Q13507 836 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 HYIQ5T013 277 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 SPOPLQ6IQ16 392 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 PHLDB3Q6NSJ2 640 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 WDR93Q6P2C0 686 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 EMBQ6PCB8 327 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 SLC47A2Q86VL8 602 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 USP38Q8NB14 1042 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 C1orf54Q8WWF1 131 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 AGO4Q9HCK5 861 aaKnown RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 AIPL1Q9NZN9 384 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 CNOT8Q9UFF9 292 aaKnown RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 PCDHA2Q9Y5H9 948 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 MYH1P12882 1939 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 TRIM66O15016 1216 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 SLC16A3O15427 465 aaKnown RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 MAPK4P31152 587 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 NSFP46459 744 aaKnown RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 LIG3P49916 1009 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 MRPS9P82933 396 aaKnown RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 DR1Q01658 176 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 HP1BP3Q5SSJ5 553 aaPredicted RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 BTNL9Q6UXG8 535 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 LPAR1Q92633 364 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.38□□□□□ -0.915e-7■■□□□ 12.4
SREK1-215ENST00000524111 MSTO1Q9BUK6 570 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 NUP85Q9BW27 656 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 TARS2Q9BW92 718 aaKnown RBP9.38□□□□□ -0.91
SREK1-215ENST00000524111 KCNK9Q9NPC2 374 aa9.38□□□□□ -0.91
SREK1-215ENST00000524111 ZNF233A6NK53 670 aa9.37□□□□□ -0.91
SREK1-215ENST00000524111 PPP2R5CQ13362 524 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms