RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ARRDC1-AS1Q9H2J1 176 aa12.54□□□□□ -0.4
CTNNA1-234ENST00000522227 SMOC1Q9H4F8 434 aa12.54□□□□□ -0.4
CTNNA1-234ENST00000522227 PSTPIP2Q9H939 334 aa12.54□□□□□ -0.4
CTNNA1-234ENST00000522227 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
CTNNA1-234ENST00000522227 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
CTNNA1-234ENST00000522227 MRPS17Q9Y2R5 130 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-234ENST00000522227 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
CTNNA1-234ENST00000522227 ASPMQ8IZT6 3477 aa12.54□□□□□ -0.4
CTNNA1-234ENST00000522227 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 TAF4O00268 1085 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 MAFGO15525 162 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 TGM5O43548 720 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 SOD2P04179 222 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 ALDH2P05091 517 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 DARSP14868 501 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 RPL17P18621 184 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 GLUD2P49448 558 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 AFF1P51825 1210 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 SATB1Q01826 763 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 PPP2R5DQ14738 602 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 ABHD15Q6UXT9 468 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 MTSS1LQ765P7 747 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 ITFG1Q8TB96 612 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 URGCPQ8TCY9 931 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 ING5Q8WYH8 240 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 FGF13Q92913 245 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 RILPL2Q969X0 211 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 HERC2P3Q9BVR0 1158 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 RHOBTB2Q9BYZ6 727 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 NFASCO94856 1347 aa12.53□□□□□ -0.4
CTNNA1-234ENST00000522227 SDK1Q7Z5N4 2213 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 IGKV6D-21A0A0A0MT36 114 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 hCG_1642624A0A1W2PR95 340 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 CARNS1A5YM72 827 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 F8W810 466 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 ATG7O95352 703 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 POMCP01189 267 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 OR1G1P47890 313 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 NOVA1P51513 510 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 GPC3P51654 580 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 C20orf194Q5TEA3 1177 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 PLA2G2FQ9BZM2 168 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 CHRDQ9H2X0 955 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 PLEKHA4Q9H4M7 779 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 AGO4Q9HCK5 861 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 ZDHHC7Q9NXF8 308 aa12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 PIN4Q9Y237 131 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 ZFP37Q9Y6Q3 630 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-234ENST00000522227 IFIT3O14879 490 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 CCL16O15467 120 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 TMOD1P28289 359 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 HOXC13P31276 330 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 CXCL12P48061 93 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 CCR3P51677 355 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 LIMK1P53667 647 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 MIS18BP1Q6P0N0 1132 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 C19orf48Q6RUI8 117 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 LSM14BQ9BX40 385 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 CNNM2Q9H8M5 875 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 FAM105AQ9NUU6 356 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 MARCH5Q9NX47 278 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 SSX2IPQ9Y2D8 614 aa12.51□□□□□ -0.41
CTNNA1-234ENST00000522227 GCN1Q92616 2671 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 SHISA7A6NL88 538 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 FOXD2O60548 495 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 ZMYND10O75800 440 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 HNRNPUQ00839 825 aaKnown RBP eCLIP12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 SOWAHCQ53LP3 525 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 KIAA1211LQ6NV74 962 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 CMTR1Q8N1G2 835 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 GATA6Q92908 595 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 MCRS1Q96EZ8 462 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 SCNM1Q9BWG6 230 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 RXFP1Q9HBX9 757 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 STK39Q9UEW8 545 aa12.5□□□□□ -0.41
CTNNA1-234ENST00000522227 FLNBO75369 2602 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 MAGEB2O15479 319 aa12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 NT5C2P49902 561 aa12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 GRM2Q14416 872 aa12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 RNF43Q68DV7 783 aa12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 AGMOQ6ZNB7 445 aa12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 HDAC7Q8WUI4 952 aa12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 TMEM175Q9BSA9 504 aa12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 GCOM2Q9BZD3 368 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 ZBTB47Q9UFB7 747 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-234ENST00000522227 SALL3Q9BXA9 1300 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 A0A087WZ62 844 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 ERICH2A1L162 156 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 ZNF806P0C7X5 589 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms