RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ETV4P43268 484 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 RRADP55042 308 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 ADAM15Q13444 863 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 GBX1Q14549 363 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 KLHDC10Q6PID8 442 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 SAPCD2Q86UD0 394 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 RTKN2Q8IZC4 609 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 PRR18Q8N4B5 295 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 GPR156Q8NFN8 814 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 KAT5Q92993 513 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 CHMP4AQ9BY43 222 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 OSBPL6Q9BZF3 934 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 C1orf112Q9NSG2 853 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 RBM12Q9NTZ6 932 aaKnown RBP5.59□□□□□ -1.51
NIPBL-207ENST00000513819 CNOT6Q9ULM6 557 aaKnown RBP5.59□□□□□ -1.51
NIPBL-207ENST00000513819 KCTD3Q9Y597 815 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 PCDHA13Q9Y5I0 950 aa5.59□□□□□ -1.51
NIPBL-207ENST00000513819 TCAF2A6NFQ2 919 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 A6NNZ2 444 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 AKR1B10O60218 316 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 DTNBO60941 627 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 MED14OSP0DP75 135 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 WASP42768 502 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 GALEQ14376 348 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 HLTFQ14527 1009 aaKnown RBP eCLIP5.58□□□□□ -1.52
NIPBL-207ENST00000513819 SEPT2Q15019 361 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 PCOLCEQ15113 449 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 UBE3CQ15386 1083 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 MAN2A1Q16706 1144 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 PGS1Q32NB8 556 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 TRIM68Q6AZZ1 485 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 MCTP2Q6DN12 878 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 PPP4R4Q6NUP7 873 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 GPR155Q7Z3F1 870 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 CAMKK1Q8N5S9 505 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 MSL3Q8N5Y2 521 aaKnown RBP5.58□□□□□ -1.52
NIPBL-207ENST00000513819 MARCH10Q8NA82 808 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-207ENST00000513819 HDAC10Q969S8 669 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 FAM84AQ96KN4 292 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 YTHDC1Q96MU7 727 aaKnown RBP5.58□□□□□ -1.52
NIPBL-207ENST00000513819 UIMC1Q96RL1 719 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 KIAA1683Q9H0B3 1180 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 NTMQ9P121 344 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 FAM184BQ9ULE4 1060 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 SMG5Q9UPR3 1016 aaKnown RBP5.58□□□□□ -1.52
NIPBL-207ENST00000513819 PTPN22Q9Y2R2 807 aa5.58□□□□□ -1.52
NIPBL-207ENST00000513819 C2orf78A6NCI8 922 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 PEX14O75381 377 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 CYP1A1P04798 512 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-207ENST00000513819 LTA4HP09960 611 aaKnown RBP5.57□□□□□ -1.52
NIPBL-207ENST00000513819 C1QTNF9P0C862 333 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 ZNF888P0CJ79 500 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-207ENST00000513819 MRE11P49959 708 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 MEOX1P50221 254 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 MGAT2Q10469 447 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 MCTP1Q6DN14 999 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 Q6ZUG5 572 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 MIGA2Q7L4E1 593 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 OVCH2Q7RTZ1 564 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 UNC5BQ8IZJ1 945 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 SNX33Q8WV41 574 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 RAB24Q969Q5 203 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 C1GALT1C1Q96EU7 318 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 PAWRQ96IZ0 340 aaKnown RBP5.57□□□□□ -1.52
NIPBL-207ENST00000513819 KATNBL1Q9H079 304 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 CHST12Q9NRB3 414 aa5.57□□□□□ -1.52
NIPBL-207ENST00000513819 RPTORQ8N122 1335 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 FFAR3O14843 346 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 DAPK3O43293 454 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 PLIN1O60240 522 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 FARP2O94887 1054 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-207ENST00000513819 ALDH2P05091 517 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 SARSP49591 514 aaKnown RBP5.56□□□□□ -1.52
NIPBL-207ENST00000513819 USP14P54578 494 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 MEF2AQ02078 507 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-207ENST00000513819 ACAP1Q15027 740 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 LLGL1Q15334 1064 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 SYCP2LQ5T4T6 812 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 FAM180AQ6UWF9 173 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 Q6ZVL8 140 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 TAS1R1Q7RTX1 841 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 CLEC14AQ86T13 490 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 DENND1CQ8IV53 801 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 RHOT1Q8IXI2 618 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 TXNDC5Q8NBS9 432 aaKnown RBP5.56□□□□□ -1.52
NIPBL-207ENST00000513819 HOXB13Q92826 284 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-207ENST00000513819 GFM2Q969S9 779 aaKnown RBP5.56□□□□□ -1.52
NIPBL-207ENST00000513819 AJUBAQ96IF1 538 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 FAM193BQ96PV7 902 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-207ENST00000513819 C7orf25Q9BPX7 421 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 SARGQ9BW04 601 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 CARD11Q9BXL7 1154 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 TMEM168Q9H0V1 697 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 TLR9Q9NR96 1032 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 ING3Q9NXR8 418 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 FAM50BQ9Y247 325 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 VWA7Q9Y334 891 aa5.56□□□□□ -1.52
NIPBL-207ENST00000513819 RBM8AQ9Y5S9 174 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms