RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 CCSER1Q9C0I3 900 aa14.39□□□□□ -0.11
COL1A2-207ENST00000478215 TMEM117Q9H0C3 514 aa14.39□□□□□ -0.11
COL1A2-207ENST00000478215 CCDC113Q9H0I3 377 aa14.39□□□□□ -0.11
COL1A2-207ENST00000478215 USP20Q9Y2K6 914 aa14.39□□□□□ -0.11
COL1A2-207ENST00000478215 ZDHHC9Q9Y397 364 aa14.39□□□□□ -0.11
COL1A2-207ENST00000478215 PCDHB2Q9Y5E7 798 aa14.39□□□□□ -0.11
COL1A2-207ENST00000478215 MORC2Q9Y6X9 1032 aaPredicted RBP14.39□□□□□ -0.11
COL1A2-207ENST00000478215 PLXNA3P51805 1871 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 NPHP3-ACAD11A0A0J9YXS1 232 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 C5orf67F2Z3F1 127 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 H3BNC9 293 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 ZNF623O75123 536 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 AXLP30530 894 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 NAMPTP43490 491 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 GPM6BQ13491 265 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 DHX8Q14562 1220 aaKnown RBP14.38□□□□□ -0.11
COL1A2-207ENST00000478215 MCM6Q14566 821 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 STK38Q15208 465 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 PCBP1Q15365 356 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL1A2-207ENST00000478215 ARSHQ5FYA8 562 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 ZBTB8OSQ8IWT0 167 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 IFT74Q96LB3 600 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 ZNF396Q96N95 335 aaPredicted RBP14.38□□□□□ -0.11
COL1A2-207ENST00000478215 EIF2AQ9BY44 585 aaKnown RBP14.38□□□□□ -0.11
COL1A2-207ENST00000478215 FZD8Q9H461 694 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 CWH43Q9H720 699 aa14.38□□□□□ -0.11
COL1A2-207ENST00000478215 TYW1Q9NV66 732 aaKnown RBP14.38□□□□□ -0.11
COL1A2-207ENST00000478215 DOCK6Q96HP0 2047 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 A0A087X0B3 334 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 SFI1A8K8P3 1242 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 SPTLC2O15270 562 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 GRM6O15303 877 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 HOXA2O43364 376 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 GTPBP6O43824 516 aaPredicted RBP14.37□□□□□ -0.11
COL1A2-207ENST00000478215 PRKCBP05771 671 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 PDIA4P13667 645 aaKnown RBP14.37□□□□□ -0.11
COL1A2-207ENST00000478215 GUCY2CP25092 1073 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 NPTX2P47972 431 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 RAB27AP51159 221 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 PEX3P56589 373 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
COL1A2-207ENST00000478215 PPP2R5AQ15172 486 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 NOTUMQ6P988 496 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 AGMOQ6ZNB7 445 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 MRPL10Q7Z7H8 261 aaKnown RBP14.37□□□□□ -0.11
COL1A2-207ENST00000478215 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 KCTD17Q8N5Z5 321 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 KRI1Q8N9T8 703 aaKnown RBP14.37□□□□□ -0.11
COL1A2-207ENST00000478215 SMG8Q8ND04 991 aaKnown RBP14.37□□□□□ -0.11
COL1A2-207ENST00000478215 RASSF8Q8NHQ8 419 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 DEPTORQ8TB45 409 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 RAD54LQ92698 747 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 C2orf40Q9H1Z8 148 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 PRDM6Q9NQX0 595 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 PRMT7Q9NVM4 692 aaPredicted RBP14.37□□□□□ -0.11
COL1A2-207ENST00000478215 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
COL1A2-207ENST00000478215 RWDD3Q9Y3V2 267 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 CNTNAP2Q9UHC6 1331 aa14.37□□□□□ -0.11
COL1A2-207ENST00000478215 BDP1A6H8Y1 2624 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 YEATS4O95619 227 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 BRD1O95696 1058 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 ITGB1P05556 798 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 RB1P06400 928 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 SKIP12755 728 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 LIG1P18858 919 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 DNM1Q05193 864 aaKnown RBP14.36□□□□□ -0.11
COL1A2-207ENST00000478215 FAM187BQ17R55 369 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 SPOUT1Q5T280 376 aaKnown RBP14.36□□□□□ -0.11
COL1A2-207ENST00000478215 TAS1R3Q7RTX0 852 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 ABI1Q8IZP0 508 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 KLHL23Q8NBE8 558 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 COLGALT1Q8NBJ5 622 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 CCDC51Q96ER9 411 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 DRC1Q96MC2 740 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 NXF3Q9H4D5 531 aaKnown RBP14.36□□□□□ -0.11
COL1A2-207ENST00000478215 ALG13Q9NP73 1137 aaKnown RBP14.36□□□□□ -0.11
COL1A2-207ENST00000478215 HES2Q9Y543 173 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 IPPQ9Y573 584 aa14.36□□□□□ -0.11
COL1A2-207ENST00000478215 C2orf16Q68DN1 1984 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 A0A1B0GUA9 196 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 B4GALT3O60512 393 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 OFD1O75665 1012 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 CSPG5O95196 566 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 NPTXRO95502 500 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 NCLP19338 710 aaKnown RBP14.35□□□□□ -0.11
COL1A2-207ENST00000478215 DNAJB1P25685 340 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 PBX3P40426 434 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 AFF1P51825 1210 aaKnown RBP14.35□□□□□ -0.11
COL1A2-207ENST00000478215 DMP1Q13316 513 aaPredicted RBP14.35□□□□□ -0.11
COL1A2-207ENST00000478215 MAPK6Q16659 721 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 NAALADL2Q58DX5 795 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 NT5DC1Q5TFE4 455 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 EEF1DP3Q658K8 133 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 LRRC43Q8N309 656 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 LARP4BQ92615 738 aaKnown RBP14.35□□□□□ -0.11
COL1A2-207ENST00000478215 P2RX5Q93086 422 aa14.35□□□□□ -0.11
COL1A2-207ENST00000478215 MRPL38Q96DV4 380 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms