RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 AGPAT5Q9NUQ2 364 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 EXOC1Q9NV70 894 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 CNTNAP2Q9UHC6 1331 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 ABHD14A-ACY1A0A1B0GW23 586 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 TSPAN1O60635 241 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 FGBP02675 491 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 NMT1P30419 496 aaKnown RBP17.6■□□□□ 0.41
GPC1-207ENST00000466624 BMP8BP34820 402 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 EPHB4P54760 987 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 NCBP1Q09161 790 aaKnown RBP17.6■□□□□ 0.41
GPC1-207ENST00000466624 IKBKEQ14164 716 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 KMT5BQ4FZB7 885 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 TMEM240Q5SV17 173 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 NT5DC1Q5TFE4 455 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 STXBP4Q6ZWJ1 553 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 TAS1R3Q7RTX0 852 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 GTPBP4Q9BZE4 634 aaKnown RBP17.6■□□□□ 0.41
GPC1-207ENST00000466624 TMX1Q9H3N1 280 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 RMND1Q9NWS8 449 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 PCDHB13Q9Y5F0 798 aa17.6■□□□□ 0.41
GPC1-207ENST00000466624 UBE4BO95155 1302 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 EIF3DO15371 548 aaKnown RBP eCLIP17.59■□□□□ 0.41
GPC1-207ENST00000466624 ACRP10323 421 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 FGFR4P22455 802 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
GPC1-207ENST00000466624 STRN3Q13033 797 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 PRPF4BQ13523 1007 aaKnown RBP17.59■□□□□ 0.41
GPC1-207ENST00000466624 DSC3Q14574 896 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 ZNF365Q70YC5 407 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 MAP4K3Q8IVH8 894 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 SMARCE1Q969G3 411 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.59■□□□□ 0.41
GPC1-207ENST00000466624 TRAIPQ9BWF2 469 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 MRPL4Q9BYD3 311 aaKnown RBP17.59■□□□□ 0.41
GPC1-207ENST00000466624 NUP62CLQ9H1M0 184 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 TSPYL2Q9H2G4 693 aaPredicted RBP17.59■□□□□ 0.41
GPC1-207ENST00000466624 PCDH10Q9P2E7 1040 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 TBX20Q9UMR3 447 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 PCDHA5Q9Y5H7 936 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 TTC3P53804 2025 aa17.59■□□□□ 0.41
GPC1-207ENST00000466624 A0A1B0GUA9 196 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 GCNT3O95395 438 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 PIGRP01833 764 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 ZSCAN20P17040 1043 aaPredicted RBP17.58■□□□□ 0.4
GPC1-207ENST00000466624 ARF4P18085 180 aaPredicted RBP17.58■□□□□ 0.4
GPC1-207ENST00000466624 HOXA11P31270 313 aaPredicted RBP17.58■□□□□ 0.4
GPC1-207ENST00000466624 TCTN1Q2MV58 587 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 L1TD1Q5T7N2 865 aaKnown RBP17.58■□□□□ 0.4
GPC1-207ENST00000466624 NOTUMQ6P988 496 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 ZPBP2Q6X784 338 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 EPM2AIP1Q7L775 607 aaPredicted RBP17.58■□□□□ 0.4
GPC1-207ENST00000466624 HERVK_113Q902F9 699 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 MTIF3Q9H2K0 278 aaKnown RBP17.58■□□□□ 0.4
GPC1-207ENST00000466624 RGS18Q9NS28 235 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 C1orf112Q9NSG2 853 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 TBC1D7Q9P0N9 293 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 PIN4Q9Y237 131 aaKnown RBP17.58■□□□□ 0.4
GPC1-207ENST00000466624 PTPRSQ13332 1948 aa17.58■□□□□ 0.4
GPC1-207ENST00000466624 B4GALT5O43286 388 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 MGEA5O60502 916 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 EDN1P05305 212 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 CASP5P51878 434 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 ZC2HC1CQ53FD0 456 aaPredicted RBP17.57■□□□□ 0.4
GPC1-207ENST00000466624 RASIP1Q5U651 963 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 ZNF507Q8TCN5 953 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 LINC01599Q8WXQ3 324 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
GPC1-207ENST00000466624 TMEM206Q9H813 350 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 EXOC7Q9UPT5 735 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 TNFSF13BQ9Y275 285 aa17.57■□□□□ 0.4
GPC1-207ENST00000466624 ENPP3O14638 875 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 N4BP3O15049 544 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 MYBP10242 640 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 RAB27AP51159 221 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 STK4Q13043 487 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 CAMK4Q16566 473 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 BMT2Q1RMZ1 405 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 KLHL40Q2TBA0 621 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 COBLL1Q53SF7 1204 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 ATF7IP2Q5U623 682 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 SLC27A1Q6PCB7 646 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 RTN4RL1Q86UN2 441 aaPredicted RBP17.56■□□□□ 0.4
GPC1-207ENST00000466624 KIAA0895Q8NCT3 520 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 HPS3Q969F9 1004 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 ACCSQ96QU6 501 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 ACO2Q99798 780 aaKnown RBP17.56■□□□□ 0.4
GPC1-207ENST00000466624 ADAM2Q99965 735 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 FGFBP2Q9BYJ0 223 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
GPC1-207ENST00000466624 KIAA1468Q9P260 1216 aa17.56■□□□□ 0.4
GPC1-207ENST00000466624 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.55■□□□□ 0.4
GPC1-207ENST00000466624 TTLL13PA6NNM8 815 aa17.55■□□□□ 0.4
GPC1-207ENST00000466624 C9IYK1 514 aa17.55■□□□□ 0.4
GPC1-207ENST00000466624 KIF20AO95235 890 aa17.55■□□□□ 0.4
GPC1-207ENST00000466624 SKIP12755 728 aa17.55■□□□□ 0.4
GPC1-207ENST00000466624 PROZP22891 400 aa17.55■□□□□ 0.4
GPC1-207ENST00000466624 WDR5P61964 334 aaKnown RBP17.55■□□□□ 0.4
GPC1-207ENST00000466624 SKOR2Q2VWA4 1001 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms