RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ARFGAP3Q9NP61 516 aa6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PAPOLBQ9NRJ5 636 aaKnown RBP6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 CEP72Q9P209 647 aa6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PDP2Q9P2J9 529 aa6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PPARGC1AQ9UBK2 798 aaKnown RBP6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RRP7AQ9Y3A4 280 aaKnown RBP6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PCDHB12Q9Y5F1 795 aa6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PCDHGC5Q9Y5F6 944 aa6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ADGRF5Q8IZF2 1346 aa6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 NEO1Q92859 1461 aa6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ABCA6Q8N139 1617 aa6.48□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 KLHL41O60662 606 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 SASH1O94885 1247 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 HRGP04196 525 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 SFTPCP11686 197 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 MXI1P50539 228 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 AMPD2Q01433 879 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 IFIT5Q13325 482 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 TNIP1Q15025 636 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 KIAA0753Q2KHM9 967 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 TUBB8Q3ZCM7 444 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 GPATCH4Q5T3I0 446 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 INTS11Q5TA45 600 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 CRTC1Q6UUV9 634 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RTKN2Q8IZC4 609 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 DCLK2Q8N568 766 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 HDAC2Q92769 488 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RSRC1Q96IZ7 334 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 WDR18Q9BV38 432 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ELAC1Q9H777 363 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RSAD1Q9HA92 442 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 TRPV5Q9NQA5 729 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 STARD7Q9NQZ5 370 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 H2AFY2Q9P0M6 372 aaPredicted RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 MTRRQ9UBK8 725 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 LRCH1Q9Y2L9 728 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PCDHGB6Q9Y5F9 930 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 LRRFIP2Q9Y608 721 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 FHOD1Q9Y613 1164 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 MROH2AA6NES4 1674 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ASXL1Q8IXJ9 1541 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 SYNJ2BP-COX16A0A087WUM0 186 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 A0A1B0GVC2 190 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 INO80B-WBP1J3KQ70 363 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 AOC2O75106 756 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 CKMP06732 381 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 TMOD1P28289 359 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 CHKAP35790 457 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 AFF1P51825 1210 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 GPR85P60893 370 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RAC1P63000 192 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 MPP1Q00013 466 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PAK1Q13153 545 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 WDR43Q15061 677 aaKnown RBP eCLIP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PREPLQ4J6C6 727 aaPredicted RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 SLC45A4Q5BKX6 768 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ATAT1Q5SQI0 421 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ZNF468Q5VIY5 522 aaPredicted RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 DENND5AQ6IQ26 1287 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RSPO2Q6UXX9 243 aaPredicted RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 CCDC91Q7Z6B0 441 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 GALNT13Q8IUC8 556 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 SLC41A1Q8IVJ1 513 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 FIBCD1Q8N539 461 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 IL22RA1Q8N6P7 574 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 EFHBQ8N7U6 833 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 SYTL5Q8TDW5 730 aaPredicted RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 CNDP2Q96KP4 475 aaKnown RBP6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ALG1Q9BT22 464 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 USP26Q9BXU7 913 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 TCF7L2Q9NQB0 619 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RAD18Q9NS91 495 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 OXSMQ9NWU1 459 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ANGPTL3Q9Y5C1 460 aa6.47□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 NPC1L1Q9UHC9 1359 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 FRMPD1Q5SYB0 1578 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 BLMP54132 1417 aaPredicted RBP6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 NPATQ14207 1427 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 MYOM1P52179 1685 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 NRXN1Q9ULB1 1477 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 LINC01387J3KSC0 135 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 MYO1BO43795 1136 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 REC8O95072 547 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 HSD3B1P14060 373 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 STMN1P16949 149 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 XPAP23025 273 aaPredicted RBP6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PPP2R1AP30153 589 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 GPR3P46089 330 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 EVCP57679 992 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RNF4P78317 190 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ID3Q02535 119 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 TRDNQ13061 729 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ASIC2Q16515 512 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PRAMEF13Q5VWM6 474 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RETSATQ6NUM9 610 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RUFY3Q7L099 469 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 SAPCD2Q86UD0 394 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PPIL6Q8IXY8 311 aa6.46□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 GRAMD1CQ8IYS0 662 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms