RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 PCDHB2Q9Y5E7 798 aa6.91□□□□□ -1.3
PNKDP1-201ENST00000435914 C2orf16Q68DN1 1984 aa6.91□□□□□ -1.3
PNKDP1-201ENST00000435914 VPS13AQ96RL7 3174 aa6.91□□□□□ -1.3
PNKDP1-201ENST00000435914 CARNS1A5YM72 827 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 CCNT1O60563 726 aaKnown RBP6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 DKC1O60832 514 aaKnown RBP eCLIP6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 ZC3H11AO75152 810 aaKnown RBP eCLIP6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 PAPLNO95428 1278 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 CXCL14O95715 111 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 SRGAP2BP0DMP2 458 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 EPCAMP16422 314 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 NCLP19338 710 aaKnown RBP6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 ARL2P36404 184 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 PTENP60484 403 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 ITIH3Q06033 890 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 DSC1Q08554 894 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 TCF15Q12870 199 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 CTTNQ14247 550 aaKnown RBP6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 EMC2Q15006 297 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 PTPN14Q15678 1187 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 LONRF3Q496Y0 759 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 KANK3Q6NY19 840 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 GLB1LQ6UWU2 654 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 FBXL6Q8N531 539 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 NECAB1Q8N987 351 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 GSTCDQ8NEC7 633 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 PSPC1Q8WXF1 523 aaKnown RBP6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 MTMR9Q96QG7 549 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 NAP1L4Q99733 375 aaKnown RBP6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 APOL5Q9BWW9 433 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 ZSWIM4Q9H7M6 989 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 MARCH5Q9NX47 278 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 CNTNAP2Q9UHC6 1331 aa6.9□□□□□ -1.3
PNKDP1-201ENST00000435914 CFAP54Q96N23 3096 aa6.9□□□□□ -1.31
PNKDP1-201ENST00000435914 PLXNA3P51805 1871 aa6.9□□□□□ -1.31
PNKDP1-201ENST00000435914 TDRD15B5MCY1 1934 aaKnown RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 BTBD18B2RXH4 712 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 C2CD4DB7Z1M9 353 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 NRP1O14786 923 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 ASAP2O43150 1006 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 TSPAN1O60635 241 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 JAK2O60674 1132 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 BRD1O95696 1058 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 PDGFBP01127 241 aaPredicted RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 SRGAP2CP0DJJ0 459 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 SPATA31C1P0DKV0 1188 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 XBP1P17861 261 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 GLRA2P23416 452 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 KRT2P35908 639 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 RARRES1P49788 294 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 MRE11P49959 708 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 CLCN4P51793 760 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 VCPP55072 806 aaKnown RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 CYP4A11Q02928 519 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 MBTD1Q05BQ5 628 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 CAPSQ13938 189 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 GIT2Q14161 759 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 ANKRD1Q15327 319 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 PCBP1Q15365 356 aaKnown RBP eCLIP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 TPRNQ4KMQ1 711 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 XKR9Q5GH70 373 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 NCAPH2Q6IBW4 605 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 KIAA1841Q6NSI8 718 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 ALYREFQ86V81 257 aaKnown RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 EXOC8Q8IYI6 725 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 COLGALT2Q8IYK4 626 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 SLFN12Q8IYM2 578 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 C12orf76Q8N812 135 aaPredicted RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 RNF149Q8NC42 400 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 ASAP3Q8TDY4 903 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 PBXIP1Q96AQ6 731 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 PGBD4Q96DM1 585 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 NECTIN4Q96NY8 510 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 KLHL5Q96PQ7 755 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 PHOX2BQ99453 314 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 EIF2AK1Q9BQI3 630 aaKnown RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 TMEM175Q9BSA9 504 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 EIF2AQ9BY44 585 aaKnown RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 NFKBIZQ9BYH8 718 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 TMEM60Q9H2L4 133 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 RNF39Q9H2S5 420 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 TTC12Q9H892 705 aaPredicted RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 RSAD1Q9HA92 442 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 BMP2KQ9NSY1 1161 aaPredicted RBP6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 ANKEF1Q9NU02 776 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 MIOSQ9NXC5 875 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 INPP5FQ9Y2H2 1132 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 IPPQ9Y573 584 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 DOCK8Q8NF50 2099 aa6.89□□□□□ -1.31
PNKDP1-201ENST00000435914 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
PNKDP1-201ENST00000435914 F8W810 466 aa6.88□□□□□ -1.31
PNKDP1-201ENST00000435914 DGAT1O75907 488 aa6.88□□□□□ -1.31
PNKDP1-201ENST00000435914 SEC24BO95487 1268 aa6.88□□□□□ -1.31
PNKDP1-201ENST00000435914 SOD2P04179 222 aa6.88□□□□□ -1.31
PNKDP1-201ENST00000435914 CNPP09543 421 aaKnown RBP6.88□□□□□ -1.31
PNKDP1-201ENST00000435914 WEE2P0C1S8 567 aa6.88□□□□□ -1.31
PNKDP1-201ENST00000435914 XRCC6P12956 609 aaKnown RBP eCLIP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms