RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 EYA4O95677 639 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 SPIDRQ14159 915 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 PDCD1Q15116 288 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 FSCN1Q16658 493 aaKnown RBP5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 C19orf54Q5BKX5 351 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 FKBP15Q5T1M5 1219 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 FAM9AQ8IZU1 332 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 CLRN3Q8NCR9 226 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 PIK3C3Q8NEB9 887 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 PAWRQ96IZ0 340 aaKnown RBP5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 ACAP3Q96P50 834 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 FDXACB1Q9BRP7 624 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 ENKD1Q9H0I2 346 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 VPS11Q9H270 941 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 TMPRSS5Q9H3S3 457 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 ING3Q9NXR8 418 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 TACR2P21452 398 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 WNT3AP56704 352 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 UGT8Q16880 541 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 CT47A1Q5JQC4 288 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 PITRM1Q5JRX3 1037 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 LMBR1LQ6UX01 489 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 TMPRSS6Q8IU80 811 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 GLB1L2Q8IW92 636 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 IL17DQ8TAD2 202 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 ARL8AQ96BM9 186 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 RAX2Q96IS3 184 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 ZNF512Q96ME7 567 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 TOPORSQ9NS56 1045 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 EVLQ9UI08 416 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 CADPSQ9ULU8 1353 aa5.04□□□□□ -1.6
HMGB3P23-201ENST00000414981 XDHP47989 1333 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 HOXA3O43365 443 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 FZD7O75084 574 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 LTA4HP09960 611 aaKnown RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 C6P13671 934 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 ACVRL1P37023 503 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 MEF2AQ02078 507 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 PPARAQ07869 468 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 TRIM25Q14258 630 aaKnown RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 RRP1BQ14684 758 aaKnown RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 UBE3CQ15386 1083 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 ELAVL1Q15717 326 aaKnown RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 CT83Q5H943 113 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 METTL24Q5JXM2 366 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 CCDC62Q6P9F0 684 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 HDGFL2Q7Z4V5 671 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 APBB1IPQ7Z5R6 666 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 FAM177A1Q8N128 213 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 Q8N1X5 172 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 MDGA1Q8NFP4 955 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 PDCD2LQ9BRP1 358 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 CDY2AQ9Y6F7 541 aa5.03□□□□□ -1.6
HMGB3P23-201ENST00000414981 PEX11BO96011 259 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 CLEC2LP0C7M8 214 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 ENPP1P22413 925 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 LGALS4P56470 323 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 MGAT5Q09328 741 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 STAT4Q14765 748 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 ZNF662Q6ZS27 426 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 USP51Q70EK9 711 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 HTR3DQ70Z44 454 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 OR5M3Q8NGP4 307 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 LMBR1Q8WVP7 490 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 EAF2Q96CJ1 260 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 ORAI2Q96SN7 254 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 POLR3GLQ9BT43 218 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 KCTD10Q9H3F6 313 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 PRDM12Q9H4Q4 367 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 PARPBPQ9NWS1 579 aa5.02□□□□□ -1.61
HMGB3P23-201ENST00000414981 GOLGA8AA7E2F4 631 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 CYR61O00622 381 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 IPO13O94829 963 aaKnown RBP5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 FSHBP01225 129 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 GDF5P43026 501 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 MAN2A2P49641 1150 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 RABGGTBP53611 331 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 MRPS9P82933 396 aaKnown RBP5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 MRPL49Q13405 166 aaKnown RBP5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 CNGB1Q14028 1251 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 RNF219Q5W0B1 726 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 NAIF1Q69YI7 327 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 IQSEC1Q6DN90 963 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 SLC16A11Q8NCK7 471 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 WDR66Q8TBY9 1149 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 SNX33Q8WV41 574 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 ST8SIA2Q92186 375 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 PLEKHG4BQ96PX9 1271 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 MNTQ99583 582 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 ZNF341Q9BYN7 854 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 CEP72Q9P209 647 aa5.01□□□□□ -1.61
HMGB3P23-201ENST00000414981 GOLGA6L6A8MZA4 724 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 GPR39O43194 453 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 AKAP8O43823 692 aaKnown RBP5□□□□□ -1.61
HMGB3P23-201ENST00000414981 GASTP01350 101 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 LPLP06858 475 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 MTHFD2P13995 350 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 GYPEP15421 78 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms