RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 DDX42Q86XP3 938 aaKnown RBP eCLIP19.6■□□□□ 0.73
SHANK3-202ENST00000414786 PKP3Q9Y446 797 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 OR1G1P47890 313 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 NNTQ13423 1086 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 UHRF1BP1Q6BDS2 1440 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 PPP1R13BQ96KQ4 1090 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 SLC25A13Q9UJS0 675 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 PCDHA6Q9UN73 950 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 SNX24Q9Y343 169 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 PCDHA8Q9Y5H6 950 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 HEATR6Q6AI08 1181 aaKnown RBP19.6■□□□□ 0.73
SHANK3-202ENST00000414786 KRT77Q7Z794 578 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 MB21D1Q8N884 522 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 LRRC37BQ96QE4 947 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 H2AFY2Q9P0M6 372 aaPredicted RBP19.6■□□□□ 0.73
SHANK3-202ENST00000414786 CNOT8Q9UFF9 292 aaKnown RBP19.6■□□□□ 0.73
SHANK3-202ENST00000414786 MAN1B1Q9UKM7 699 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L5A8MUK1 530 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 ZNF197O14709 1029 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 BEND6Q5SZJ8 279 aaPredicted RBP19.6■□□□□ 0.73
SHANK3-202ENST00000414786 FAM102AQ5T9C2 384 aaPredicted RBP19.6■□□□□ 0.73
SHANK3-202ENST00000414786 PGBD4Q96DM1 585 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 KIFC3Q9BVG8 833 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 TMEM63CQ9P1W3 806 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 IKBKBO14920 756 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 FCER1AP12319 257 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 PHKG2P15735 406 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 TRPC1P48995 793 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 LATS2Q9NRM7 1088 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 E9PMD0 336 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 EN1Q05925 392 aaPredicted RBP19.6■□□□□ 0.73
SHANK3-202ENST00000414786 PPP2R3CQ969Q6 453 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 BCL2L14Q9BZR8 327 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 ASNSD1Q9NWL6 643 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L15C9J2P7 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L13C9JLJ4 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L11C9JVI0 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L18D6R9N7 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L22D6RA61 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L17D6RBQ6 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L19D6RCP7 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L20D6RJB6 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 CYTH3O43739 400 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L24Q0WX57 530 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 TTLL4Q14679 1199 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 LRRC14Q15048 493 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 USP17L6PQ6QN14 398 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 MMS22LQ6ZRQ5 1243 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 SMIM5Q71RC9 77 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 FGD2Q7Z6J4 655 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 AIFM3Q96NN9 605 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 FBXO2Q9UK22 296 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 NFU1Q9UMS0 254 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 LINC00854A0A1B0GVQ3 168 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 GSNP06396 782 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 CRKP46108 304 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 CYTH1Q15438 398 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 BZW1Q7L1Q6 419 aaKnown RBP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 SEPT12Q8IYM1 358 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 COG1Q8WTW3 980 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 PABPC5Q96DU9 382 aaKnown RBP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 ALDH18A1P54886 795 aaKnown RBP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 PDAP1Q13442 181 aaKnown RBP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 ARHGEF7Q14155 803 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 FMO2Q99518 471 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 SLFNL1Q499Z3 407 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 POLR3FQ9H1D9 316 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 CAB39Q9Y376 341 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 ERVV-2B6SEH9 535 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 RASA4BC9J798 803 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 RASA4O43374 803 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 GYS2P54840 703 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 TMEM260Q9NX78 707 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 LEMD3Q9Y2U8 911 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 FKBP9O95302 570 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 KRT31Q15323 416 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 C6orf10Q5SRN2 563 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 FKBP9P1Q75LS8 142 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 PID1Q7Z2X4 250 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 JRKLQ9Y4A0 524 aa19.59■□□□□ 0.73
SHANK3-202ENST00000414786 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
SHANK3-202ENST00000414786 POLR3AO14802 1390 aaPredicted RBP19.58■□□□□ 0.73
SHANK3-202ENST00000414786 ECE2O60344 883 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 PROSER3Q2NL68 480 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 SESN2P58004 480 aaPredicted RBP19.58■□□□□ 0.73
SHANK3-202ENST00000414786 PKP1Q13835 747 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 PDXDC1Q6P996 788 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 SPACA7Q96KW9 195 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 PITPNM3Q9BZ71 974 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 SMARCAD1Q9H4L7 1026 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 GPS1Q13098 491 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 LRRC36Q1X8D7 754 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 SPATS2Q86XZ4 545 aaKnown RBP19.58■□□□□ 0.73
SHANK3-202ENST00000414786 KIAA2013Q8IYS2 634 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 GGT7Q9UJ14 662 aa19.58■□□□□ 0.73
SHANK3-202ENST00000414786 POTEMA6NI47 508 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 TCN1P20061 433 aaPredicted RBP19.58■□□□□ 0.72
SHANK3-202ENST00000414786 MAN2A1Q16706 1144 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 513.6 ms