RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 PHLPP2Q6ZVD8 1323 aa33.67■■■□□ 2.98
CSNK1E-206ENST00000413574 ACTN1P12814 892 aa33.67■■■□□ 2.98
CSNK1E-206ENST00000413574 HOXA11P31270 313 aaPredicted RBP33.67■■■□□ 2.98
CSNK1E-206ENST00000413574 EHHADHQ08426 723 aa33.67■■■□□ 2.98
CSNK1E-206ENST00000413574 CAMK4Q16566 473 aa33.67■■■□□ 2.98
CSNK1E-206ENST00000413574 ZNF720Q7Z2F6 126 aa33.67■■■□□ 2.98
CSNK1E-206ENST00000413574 TMEM134Q9H6X4 195 aa33.67■■■□□ 2.98
CSNK1E-206ENST00000413574 OLFML3Q9NRN5 406 aa33.67■■■□□ 2.98
CSNK1E-206ENST00000413574 ARF4P18085 180 aaPredicted RBP33.66■■■□□ 2.98
CSNK1E-206ENST00000413574 LIN28BQ6ZN17 250 aaKnown RBP eCLIP33.66■■■□□ 2.98
CSNK1E-206ENST00000413574 CDR2LQ86X02 465 aaPredicted RBP33.66■■■□□ 2.98
CSNK1E-206ENST00000413574 ADAM2Q99965 735 aa33.66■■■□□ 2.98
CSNK1E-206ENST00000413574 PTPRSQ13332 1948 aa33.66■■■□□ 2.98
CSNK1E-206ENST00000413574 ZBBXA8MT70 800 aa33.65■■■□□ 2.98
CSNK1E-206ENST00000413574 MYBP10242 640 aa33.65■■■□□ 2.98
CSNK1E-206ENST00000413574 DSC3Q14574 896 aa33.65■■■□□ 2.98
CSNK1E-206ENST00000413574 FAM187BQ17R55 369 aa33.65■■■□□ 2.98
CSNK1E-206ENST00000413574 PPP4R3CPQ6ZMV5 832 aa33.65■■■□□ 2.98
CSNK1E-206ENST00000413574 LOC101059915A0A1B0GWI6 518 aaPredicted RBP33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 ACKR2O00590 384 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 ENPP3O14638 875 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 GCNT3O95395 438 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 PRPF4BQ13523 1007 aaKnown RBP33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 FAM26FQ5R3K3 315 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 NT5DC1Q5TFE4 455 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 HERVK_113Q902F9 699 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 FTHL17Q9BXU8 183 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 ABHD14A-ACY1A0A1B0GW23 586 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 GTF2BQ00403 316 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 PRIMPOLQ96LW4 560 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 EXOC1Q9NV70 894 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 TBX20Q9UMR3 447 aa33.64■■■□□ 2.98
CSNK1E-206ENST00000413574 LAMA3Q16787 3333 aa33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 ZSCAN20P17040 1043 aaPredicted RBP33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 IBSPP21815 317 aaPredicted RBP33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 BMP8BP34820 402 aa33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 WDR5P61964 334 aaKnown RBP33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 PCBP1Q15365 356 aaKnown RBP eCLIP33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 ELOA2Q8IYF1 753 aaPredicted RBP33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 STRA6Q9BX79 667 aa33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 PRO3102Q9H379 93 aa33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 ST6GALNAC4Q9H4F1 302 aa33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 SLC39A2Q9NP94 309 aa33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 HOOK1Q9UJC3 728 aaKnown RBP33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 PCDHA5Q9Y5H7 936 aa33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 CNTNAP2Q9UHC6 1331 aa33.63■■■□□ 2.97
CSNK1E-206ENST00000413574 H0YCG3 227 aa33.62■■■□□ 2.97
CSNK1E-206ENST00000413574 PPP1R37O75864 691 aa33.62■■■□□ 2.97
CSNK1E-206ENST00000413574 BAIAP3O94812 1187 aa33.62■■■□□ 2.97
CSNK1E-206ENST00000413574 KCNA1Q09470 495 aa33.62■■■□□ 2.97
CSNK1E-206ENST00000413574 STRN3Q13033 797 aa33.62■■■□□ 2.97
CSNK1E-206ENST00000413574 TSPYL2Q9H2G4 693 aaPredicted RBP33.62■■■□□ 2.97
CSNK1E-206ENST00000413574 DEFB103AP81534 67 aa33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 TWF2Q6IBS0 349 aaKnown RBP33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 TMCO2Q7Z6W1 182 aaPredicted RBP33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 TARS2Q9BW92 718 aaKnown RBP33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 IKZF4Q9H2S9 585 aa33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 CHST12Q9NRB3 414 aa33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 RGS18Q9NS28 235 aa33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 NCBP1Q09161 790 aaKnown RBP33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 STK4Q13043 487 aa33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 TMEM132AQ24JP5 1023 aa33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 SLC17A8Q8NDX2 589 aa33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 RNPC3Q96LT9 517 aaKnown RBP33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 CLSTN2Q9H4D0 955 aa33.61■■■□□ 2.97
CSNK1E-206ENST00000413574 PRPF6O94906 941 aaKnown RBP33.6■■■□□ 2.97
CSNK1E-206ENST00000413574 RASIP1Q5U651 963 aa33.6■■■□□ 2.97
CSNK1E-206ENST00000413574 KCNN1Q92952 543 aa33.6■■■□□ 2.97
CSNK1E-206ENST00000413574 MRPL4Q9BYD3 311 aaKnown RBP33.6■■■□□ 2.97
CSNK1E-206ENST00000413574 A0A1B0GUA9 196 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 AXLP30530 894 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 UBXN11Q5T124 520 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 EEF1DP3Q658K8 133 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 NOTUMQ6P988 496 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 KIAA0895Q8NCT3 520 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 SPATA20Q8TB22 786 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 SMARCE1Q969G3 411 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 ACO2Q99798 780 aaKnown RBP33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 EIF2AQ9BY44 585 aaKnown RBP33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 PDZD7Q9H5P4 517 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 TTC3P53804 2025 aa33.59■■■□□ 2.97
CSNK1E-206ENST00000413574 RHOBTB3O94955 611 aa33.58■■■□□ 2.97
CSNK1E-206ENST00000413574 ATF7IP2Q5U623 682 aa33.58■■■□□ 2.97
CSNK1E-206ENST00000413574 MYOCDQ8IZQ8 938 aa33.58■■■□□ 2.97
CSNK1E-206ENST00000413574 PCDHB13Q9Y5F0 798 aa33.58■■■□□ 2.97
CSNK1E-206ENST00000413574 C9IYK1 514 aa33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 SMC2O95347 1197 aa33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 KCNJ6P48051 423 aa33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 KCNB1Q14721 858 aa33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 PRPF38BQ5VTL8 546 aaKnown RBP33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 EPM2AIP1Q7L775 607 aaPredicted RBP33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 MAP4K3Q8IVH8 894 aa33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 CCDC47Q96A33 483 aaKnown RBP33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 SLC4A7Q9Y6M7 1214 aa33.57■■■□□ 2.97
CSNK1E-206ENST00000413574 EFCAB14O75071 495 aa33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 MBD3O95983 291 aa33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 L1TD1Q5T7N2 865 aaKnown RBP33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 ISM2Q6H9L7 571 aa33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 SLC24A5Q71RS6 500 aa33.57■■■□□ 2.96
CSNK1E-206ENST00000413574 BICD1Q96G01 975 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms