RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 NEDD1Q8NHV4 660 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 ADAM32Q8TC27 787 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 NSUN4Q96CB9 384 aaKnown RBP6.17□□□□□ -1.42
CNGA1-202ENST00000402813 SH3GL3Q99963 347 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 OCSTAMPQ9BR26 566 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 FOXP3Q9BZS1 431 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 RABEP2Q9H5N1 569 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 NRDE2Q9H7Z3 1164 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 POLMQ9NP87 494 aaPredicted RBP6.17□□□□□ -1.42
CNGA1-202ENST00000402813 MARK1Q9P0L2 795 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 VPS28Q9UK41 221 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 PRELID1Q9Y255 219 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 PASKQ96RG2 1323 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 ARHGAP31Q2M1Z3 1444 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 IFT172Q9UG01 1749 aa6.17□□□□□ -1.42
CNGA1-202ENST00000402813 GOLGA8AA7E2F4 631 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 GOLGA8BA8MQT2 603 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 GNAT3A8MTJ3 354 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 ENC1O14682 589 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CSTBP04080 98 aaKnown RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 SNRNP70P08621 437 aaKnown RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CLTBP09497 229 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 SFPQP23246 707 aaKnown RBP eCLIP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 IRS1P35568 1242 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 NFIAQ12857 509 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 IKBKEQ14164 716 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 INTS3Q68E01 1043 aaKnown RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 RGS9BPQ6ZS82 235 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CEP97Q8IW35 865 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 FBXO15Q8NCQ5 510 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 FAM216AQ8WUB2 273 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 RFFLQ8WZ73 363 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 NSRP1Q9H0G5 558 aaKnown RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 SYNCQ9H7C4 482 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CCDC177Q9NQR7 707 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 PTPRTO14522 1441 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 AATKQ6ZMQ8 1374 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 DLATP10515 647 aaKnown RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 RAG1P15918 1043 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 KELP23276 732 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 YY1P25490 414 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CNTFP26441 200 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 TPP2P29144 1249 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 HTD2P86397 168 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 BFSP1Q12934 665 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 KRT32Q14532 448 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 PLCL1Q15111 1095 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 HGSNATQ68CP4 663 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 ATF7IPQ6VMQ6 1270 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 MAML2Q8IZL2 1156 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 C2orf69Q8N8R5 385 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 GDAP1Q8TB36 358 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 PTP4A1Q93096 173 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CABS1Q96KC9 395 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 RUNDC3BQ96NL0 473 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 DACH2Q96NX9 599 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 RRAGDQ9NQL2 400 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 ADPRHL2Q9NX46 363 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 ZSWIM5Q9P217 1185 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 FAM153AQ9UHL3 310 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 MADDQ8WXG6 1647 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CGNL1Q0VF96 1302 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 NRXN1Q9ULB1 1477 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 KDRP35968 1356 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 EBAG9O00559 213 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 TSPAN1O60635 241 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 MT-CO1P00395 513 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 ASGR1P07306 291 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 RPSAP08865 295 aaKnown RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 IDUAP35475 653 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 ABCG1P45844 678 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 YBEYP58557 167 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 IFI35P80217 286 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 RBP5P82980 135 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 HNRNPUQ00839 825 aaKnown RBP eCLIP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 GALNT1Q10472 559 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 ZNF674Q2M3X9 581 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 AARDQ4LEZ3 155 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 UBXN11Q5T124 520 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 MRPL10Q7Z7H8 261 aaKnown RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 SYTL1Q8IYJ3 562 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CACNA2D3Q8IZS8 1091 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 KRT78Q8N1N4 520 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 TMEM102Q8N9M5 508 aaPredicted RBP6.16□□□□□ -1.42
CNGA1-202ENST00000402813 ADAMTS15Q8TE58 950 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 USP7Q93009 1102 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 TUBGCP3Q96CW5 907 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 C7orf26Q96N11 449 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 SLC4A9Q96Q91 983 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 HGH1Q9BTY7 390 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 MMRN2Q9H8L6 949 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 FAM204AQ9H8W3 233 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 LRFN2Q9ULH4 789 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 CLEC4AQ9UMR7 237 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 GPSM3Q9Y4H4 160 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 PCDHGB6Q9Y5F9 930 aa6.16□□□□□ -1.42
CNGA1-202ENST00000402813 C9orf84Q5VXU9 1444 aa6.15□□□□□ -1.42
CNGA1-202ENST00000402813 ASXL2Q76L83 1435 aa6.15□□□□□ -1.42
CNGA1-202ENST00000402813 RGSL1A5PLK6 1076 aa6.15□□□□□ -1.42
CNGA1-202ENST00000402813 ZSCAN5CA6NGD5 496 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms