RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 VPS18Q9P253 973 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 SALL4Q9UJQ4 1053 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 GJD2Q9UKL4 321 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 A0A087X0T9 212 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 GTPBP10A4D1E9 387 aaKnown RBP15.43■□□□□ 0.06
VRK3-201ENST00000316763 LRRIQ3A6PVS8 624 aaPredicted RBP15.43■□□□□ 0.06
VRK3-201ENST00000316763 BTNL10A8MVZ5 291 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 ZBTB39O15060 712 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 AKAP3O75969 853 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 FAM228BP0C875 321 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 TGFB3P10600 412 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 SLC9A1P19634 815 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 PON1P27169 355 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 QARSP47897 775 aaKnown RBP15.43■□□□□ 0.06
VRK3-201ENST00000316763 KIAA0753Q2KHM9 967 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 ZNF792Q3KQV3 632 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 VPS36Q86VN1 386 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 PKNOX2Q96KN3 472 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 TLR10Q9BXR5 811 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 BCAS3Q9H6U6 928 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 JPH1Q9HDC5 661 aaPredicted RBP15.43■□□□□ 0.06
VRK3-201ENST00000316763 SLC9A2Q9UBY0 812 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 ADAMTS1Q9UHI8 967 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 TCEAL9Q9UHQ7 104 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 SAMM50Q9Y512 469 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 PCDHA10Q9Y5I2 948 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 ERICH4A6NGS2 130 aa15.42■□□□□ 0.06
VRK3-201ENST00000316763 ACTN1P12814 892 aa15.42■□□□□ 0.06
VRK3-201ENST00000316763 PSMC2P35998 433 aaKnown RBP15.42■□□□□ 0.06
VRK3-201ENST00000316763 APBA1Q02410 837 aa15.42■□□□□ 0.06
VRK3-201ENST00000316763 ENOX2Q16206 610 aaKnown RBP15.42■□□□□ 0.06
VRK3-201ENST00000316763 GLE1Q53GS7 698 aaKnown RBP15.42■□□□□ 0.06
VRK3-201ENST00000316763 SEPT14Q6ZU15 432 aa15.42■□□□□ 0.06
VRK3-201ENST00000316763 DPP9Q86TI2 863 aa15.42■□□□□ 0.06
VRK3-201ENST00000316763 C4orf19Q8IY42 314 aa15.42■□□□□ 0.06
VRK3-201ENST00000316763 ODF2LQ9ULJ1 636 aa15.42■□□□□ 0.06
VRK3-201ENST00000316763 ZNF236Q9UL36 1845 aa15.42■□□□□ 0.06
VRK3-201ENST00000316763 CLIC2O15247 247 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 NCK2O43639 380 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 PALMO75781 387 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 AARSP49588 968 aaKnown RBP eCLIP15.41■□□□□ 0.06
VRK3-201ENST00000316763 PSMC5P62195 406 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 IRF2BP2Q7Z5L9 587 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 FAM186BQ8IYM0 893 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 USP6NLQ92738 828 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 MKNK1Q9BUB5 465 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 CALCOCO1Q9P1Z2 691 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 PCDHGC5Q9Y5F6 944 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 LRRC37A2A6NM11 1700 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 MCM3APO60318 1980 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 MYH11P35749 1972 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 CASP8AP2Q9UKL3 1982 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 GRID2IPA4D2P6 1211 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 ASB14A6NK59 587 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 SFI1A8K8P3 1242 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 KLRC1P26715 233 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 CXCR5P32302 372 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 PRKCIP41743 596 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 MAP2K5Q13163 448 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 UGCGQ16739 394 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 DPY19L2P1Q6NXN4 242 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 HS2ST1Q7LGA3 356 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 ZNF467Q7Z7K2 595 aaPredicted RBP15.41■□□□□ 0.06
VRK3-201ENST00000316763 GOLGA6L1Q8N7Z2 621 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 GOLGA5Q8TBA6 731 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 SLC35C1Q96A29 364 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 PSMB7Q99436 277 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 GCNT4Q9P109 453 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 DBR1Q9UK59 544 aaKnown RBP15.41■□□□□ 0.06
VRK3-201ENST00000316763 HPCAL4Q9UM19 191 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 GABRQQ9UN88 632 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 PCDHB13Q9Y5F0 798 aa15.41■□□□□ 0.06
VRK3-201ENST00000316763 ATP8B3O60423 1300 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 TGFB1I1O43294 461 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 ZMYND10O75800 440 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 ATG7O95352 703 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 UBA1P22314 1058 aaKnown RBP15.4■□□□□ 0.06
VRK3-201ENST00000316763 NMT1P30419 496 aaKnown RBP15.4■□□□□ 0.06
VRK3-201ENST00000316763 MATR3P43243 847 aaKnown RBP eCLIP15.4■□□□□ 0.06
VRK3-201ENST00000316763 CASP4P49662 377 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 ACTR2P61160 394 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 PTK2Q05397 1052 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 ABHD15Q6UXT9 468 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 FMNL3Q8IVF7 1028 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 FAM178BQ8IXR5 827 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 NPLOC4Q8TAT6 608 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 TAF4BQ92750 862 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 LRRC1Q9BTT6 524 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 SELENOOQ9BVL4 669 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 FRMD4BQ9Y2L6 1034 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 FAN1Q9Y2M0 1017 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 KIAA1217Q5T5P2 1943 aa15.4■□□□□ 0.06
VRK3-201ENST00000316763 ARHGEF35A5YM69 484 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 N4BP1O75113 896 aaKnown RBP15.39■□□□□ 0.05
VRK3-201ENST00000316763 FERP16591 822 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 CYP2B6P20813 491 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 ZNF131P52739 623 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 MEI1Q5TIA1 1274 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 C8orf74Q6P047 294 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 KCNV1Q6PIU1 500 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms