RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 GTF2A1P52655 376 aaPredicted RBP16.34■□□□□ 0.21
CSDC2-201ENST00000306149 DR1Q01658 176 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 RPUSD2Q8IZ73 545 aaKnown RBP16.34■□□□□ 0.21
CSDC2-201ENST00000306149 OTUD6BQ8N6M0 293 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 PRPF38AQ8NAV1 312 aaKnown RBP16.34■□□□□ 0.21
CSDC2-201ENST00000306149 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 SNX24Q9Y343 169 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 ZHX2Q9Y6X8 837 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 LOXHD1Q8IVV2 1947 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 BRWD3Q6RI45 1802 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 VAMP7P51809 220 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
CSDC2-201ENST00000306149 KRT71Q3SY84 523 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 RUFY4Q6ZNE9 571 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 KCTD17Q8N5Z5 321 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 C3orf20Q8ND61 904 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 C18orf8Q96DM3 657 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 BTBD6Q96KE9 485 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
CSDC2-201ENST00000306149 SGPL1O95470 568 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 FNTAP49354 379 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 PLTPP55058 493 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 PTENP60484 403 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 MESDQ14696 234 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 KIF22Q14807 665 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 C1orf220Q5T0J3 134 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 AGBL2Q5U5Z8 902 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 FBXW10Q5XX13 1052 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 SLC12A6Q9UHW9 1150 aa16.33■□□□□ 0.21
CSDC2-201ENST00000306149 TTC7AQ9ULT0 858 aaPredicted RBP16.33■□□□□ 0.21
CSDC2-201ENST00000306149 CCDC172P0C7W6 258 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 BCRP11274 1271 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 MAGOHP61326 146 aaKnown RBP16.33■□□□□ 0.2
CSDC2-201ENST00000306149 SPP2Q13103 211 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 DLGAP5Q15398 846 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 CHADLQ6NUI6 762 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 C7orf43Q8WVR3 580 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 MAGOHBQ96A72 148 aaKnown RBP16.33■□□□□ 0.2
CSDC2-201ENST00000306149 PCDHB18PQ96TA0 734 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 FMO2Q99518 471 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 EHMT1Q9H9B1 1298 aa16.33■□□□□ 0.2
CSDC2-201ENST00000306149 SLC16A4O15374 487 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 TRAF1Q13077 416 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 UBAP2Q5T6F2 1119 aaKnown RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 STYK1Q6J9G0 422 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 KCNV1Q6PIU1 500 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 ZDHHC14Q8IZN3 488 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 CCDC127Q96BQ5 260 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 CARD9Q9H257 536 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 FAM114A2Q9NRY5 505 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 LARSQ9P2J5 1176 aaKnown RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 DAAM1Q9Y4D1 1078 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 UBE4BO95155 1302 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 DHX15O43143 795 aaKnown RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 SHBGP04278 402 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 SETQ01105 290 aaPredicted RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 MAP2K1Q02750 393 aaPredicted RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 IFFO1Q0D2I5 559 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 SLC9A9Q8IVB4 645 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 UHMK1Q8TAS1 419 aaKnown RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 FAM151AQ8WW52 585 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 FAM84AQ96KN4 292 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 POP1Q99575 1024 aaKnown RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 HSPBP1Q9NZL4 362 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 KCND2Q9NZV8 630 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 CAPN7Q9Y6W3 813 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 SMIM23A6NLE4 172 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 VCAM1P19320 739 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 HNRNPH1P31943 449 aaKnown RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 RARRES1P49788 294 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 PEX3P56589 373 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 RNF187Q5TA31 235 aaPredicted RBP16.32■□□□□ 0.2
CSDC2-201ENST00000306149 PPM1KQ8N3J5 372 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 ERP44Q9BS26 406 aa16.32■□□□□ 0.2
CSDC2-201ENST00000306149 CNTNAP1P78357 1384 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 TCRBV7S2A1N4TA0A589 114 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 CYP26A1O43174 497 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 CALCAP01258 141 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 P4HBP07237 508 aaKnown RBP16.31■□□□□ 0.2
CSDC2-201ENST00000306149 COMTP21964 271 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 IFT88Q13099 833 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 UGCGQ16739 394 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 INTS8Q75QN2 995 aaKnown RBP16.31■□□□□ 0.2
CSDC2-201ENST00000306149 HAUS6Q7Z4H7 955 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 SLC47A2Q86VL8 602 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 JAMLQ86YT9 394 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 MDM1Q8TC05 714 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 FBXO25Q8TCJ0 367 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 CEP89Q96ST8 783 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 RIT2Q99578 217 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 ZNF646O15015 1829 aaPredicted RBP16.31■□□□□ 0.2
CSDC2-201ENST00000306149 PAEPP09466 180 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 ALAS1P13196 640 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 CAP2P40123 477 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 SF3A3Q12874 501 aaKnown RBP eCLIP16.31■□□□□ 0.2
CSDC2-201ENST00000306149 SPDYCQ5MJ68 293 aa16.31■□□□□ 0.2
CSDC2-201ENST00000306149 SWT1Q5T5J6 900 aaKnown RBP16.31■□□□□ 0.2
CSDC2-201ENST00000306149 DUPD1Q68J44 220 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 1020.3 ms