RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 ACTRT1Q8TDG2 376 aa19.24■□□□□ 0.67
TSPAN17-201ENST00000298564 CHMP6Q96FZ7 201 aa19.24■□□□□ 0.67
TSPAN17-201ENST00000298564 XPO6Q96QU8 1125 aaKnown RBP19.24■□□□□ 0.67
TSPAN17-201ENST00000298564 AZI2Q9H6S1 392 aa19.24■□□□□ 0.67
TSPAN17-201ENST00000298564 ACTR5Q9H9F9 607 aaPredicted RBP19.24■□□□□ 0.67
TSPAN17-201ENST00000298564 A1CFQ9NQ94 594 aaKnown RBP19.24■□□□□ 0.67
TSPAN17-201ENST00000298564 GCNT4Q9P109 453 aa19.24■□□□□ 0.67
TSPAN17-201ENST00000298564 ZMYM2Q9UBW7 1377 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 DDX39AO00148 427 aaKnown RBP19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 SLC16A3O15427 465 aaKnown RBP19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 ELF3P78545 371 aaPredicted RBP19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 BIRC3Q13489 604 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 TTLL6Q8N841 843 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 MIEF2Q96C03 454 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 FMO2Q99518 471 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 SIX2Q9NPC8 291 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 GBP2P32456 591 aaPredicted RBP19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 CAP2P40123 477 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 OTUD6AQ7L8S5 288 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 KCTD17Q8N5Z5 321 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 PBKQ96KB5 322 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 AGBL1Q96MI9 1066 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 PKD2L1Q9P0L9 805 aa19.23■□□□□ 0.67
TSPAN17-201ENST00000298564 ATAD5Q96QE3 1844 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 DDX3XO00571 662 aaKnown RBP eCLIP19.22■□□□□ 0.671e-8■■■■■ 31.1
TSPAN17-201ENST00000298564 NEBLO76041 1014 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 EN1Q05925 392 aaPredicted RBP19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 WLSQ5T9L3 541 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 FAM186BQ8IYM0 893 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 BORCS6Q96GS4 357 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 NACC1Q96RE7 527 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 NOD2Q9HC29 1040 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 DBR1Q9UK59 544 aaKnown RBP19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 IGSF9BQ9UPX0 1349 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 TMEM110-MUSTN1A8MSY1 372 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 EIF3DO15371 548 aaKnown RBP eCLIP19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 KRT13P13646 458 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 EZRP15311 586 aaKnown RBP19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 GALCP54803 685 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 ADCY1Q08828 1119 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 MYO1EQ12965 1108 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 DCAF12L1Q5VU92 463 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 ZNF720Q7Z2F6 126 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 TAX1BP1Q86VP1 789 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 FAM178BQ8IXR5 827 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 FIZ1Q96SL8 496 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 EHMT1Q9H9B1 1298 aa19.22■□□□□ 0.67
TSPAN17-201ENST00000298564 IPO5O00410 1097 aaKnown RBP19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 H2AFZP0C0S5 128 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 ZBTB48P10074 688 aaPredicted RBP19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 FGFR4P22455 802 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 PSMC2P35998 433 aaKnown RBP19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 SLC29A2Q14542 456 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 PLCB4Q15147 1175 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 H2AFVQ71UI9 128 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 NT5DC3Q86UY8 548 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 FAM160B2Q86V87 743 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 PRCCQ92733 491 aaPredicted RBP19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 ATP6V1G2O95670 118 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 ODR4Q5SWX8 454 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 RTKN2Q8IZC4 609 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 KIF2BQ8N4N8 673 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 CCDC26Q8TAB7 109 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 FBXO25Q8TCJ0 367 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 EPS8L3Q8TE67 593 aaKnown RBP19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 ATP8B4Q8TF62 1192 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 RNF25Q96BH1 459 aaPredicted RBP19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 LXNQ9BS40 222 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 WDR11Q9BZH6 1224 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 SEMA4AQ9H3S1 761 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 ABCF3Q9NUQ8 709 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 TAS2R14Q9NYV8 317 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 FEM1BQ9UK73 627 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 AGAP1Q9UPQ3 857 aa19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 BZW2Q9Y6E2 419 aaKnown RBP19.21■□□□□ 0.67
TSPAN17-201ENST00000298564 COL4A5P29400 1685 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 CCDC197Q8NCU1 140 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 SLC35G2Q8TBE7 412 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 C18orf8Q96DM3 657 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 TEKT3Q9BXF9 490 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 STK32BQ9NY57 414 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 FRMPD4Q14CM0 1322 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 CCT8L1PA6NM43 557 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 ITGB5P18084 799 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 CYP2J2P51589 502 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 PLS1Q14651 629 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 ERMARDQ5T6L9 678 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 MAEAQ7L5Y9 396 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 CCDC25Q86WR0 208 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 PALB2Q86YC2 1186 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 A8MUI8 341 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 TBC1D12O60347 775 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 UPP2O95045 317 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 RXRBP28702 533 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 JAM2P57087 298 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 KCNJ2P63252 427 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 PPP2R5AQ15172 486 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 RPAINQ86UA6 219 aa19.2■□□□□ 0.66
TSPAN17-201ENST00000298564 EPB41L4BQ9H329 900 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms