RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 KPNA2P52292 529 aaKnown RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 TSTA3Q13630 321 aaPredicted RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 TWF2Q6IBS0 349 aaKnown RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 APOBEC3FQ8IUX4 373 aaKnown RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 C2orf40Q9H1Z8 148 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 ANGPTL3Q9Y5C1 460 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 ATP8B3O60423 1300 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 EMSYQ7Z589 1322 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 IQANK1A0A1B0GTG1 560 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 TTLL4Q14679 1199 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 RHPN2Q8IUC4 686 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 ADSSL1Q8N142 457 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 FBXL13Q8NEE6 735 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 ZNF668Q96K58 619 aaPredicted RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 CACYBPQ9HB71 228 aaKnown RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 HDAC6Q9UBN7 1215 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 CHD2O14647 1828 aaKnown RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 ESYT3A0FGR9 886 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 NCK2O43639 380 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 KRT3P12035 628 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 CHRNA5P30532 468 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 ARL4CP56559 192 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 SATB1Q01826 763 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 PDCLQ13371 301 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 FRMD5Q7Z6J6 570 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 FAF2Q96CS3 445 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 KLC2Q9H0B6 622 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 Q9H521 79 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 OPHN1O60890 802 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 HUS1O60921 280 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 NMT1P30419 496 aaKnown RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 GYS2P54840 703 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 HIBCHQ6NVY1 386 aaPredicted RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 CFAP36Q96G28 342 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 ASNSD1Q9NWL6 643 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 UBE4BO95155 1302 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 FAM133BQ5BKY9 247 aaKnown RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 NT5DC1Q5TFE4 455 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 OTUD5Q96G74 571 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 CALR3Q96L12 384 aaKnown RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 NUP85Q9BW27 656 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 MID2Q9UJV3 735 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 HEY1Q9Y5J3 304 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 ATRNO75882 1429 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 MRC1P22897 1456 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 PPP1R3GB7ZBB8 358 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 GNAT1P11488 350 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 ANXA13P27216 316 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 HMGCS2P54868 508 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 STK4Q13043 487 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 CYFIP1Q7L576 1253 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 ENOSF1Q7L5Y1 443 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 C2orf69Q8N8R5 385 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 CEP120Q8N960 986 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 TTC1Q99614 292 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 MRPL4Q9BYD3 311 aaKnown RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 POLR3FQ9H1D9 316 aaPredicted RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 RBAKQ9NYW8 714 aaPredicted RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 NYAP2Q9P242 653 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 CPSF2Q9P2I0 782 aaKnown RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 S100BP04271 92 aaPredicted RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 PLS3P13797 630 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 RASA1P20936 1047 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 GNA15P30679 374 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 SDC4P31431 198 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 FXR1P51114 621 aaKnown RBP eCLIP12.28□□□□□ -0.44
NOD1-201ENST00000222823 GPC3P51654 580 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 PDXDC1Q6P996 788 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 RAD9BQ6WBX8 426 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 RFFLQ8WZ73 363 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 VPS39Q96JC1 886 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 CHP1Q99653 195 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 PCSK1NQ9UHG2 260 aa12.28□□□□□ -0.44
NOD1-201ENST00000222823 AGO2Q9UKV8 859 aaKnown RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 ABT1Q9ULW3 272 aaKnown RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 PACSIN2Q9UNF0 486 aaPredicted RBP12.28□□□□□ -0.44
NOD1-201ENST00000222823 EPHB1P54762 984 aa12.27□□□□□ -0.44
NOD1-201ENST00000222823 GBP7Q8N8V2 638 aaPredicted RBP12.27□□□□□ -0.44
NOD1-201ENST00000222823 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.27□□□□□ -0.44
NOD1-201ENST00000222823 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.27□□□□□ -0.44
NOD1-201ENST00000222823 EPC1Q9H2F5 836 aa12.27□□□□□ -0.44
NOD1-201ENST00000222823 TUFT1Q9NNX1 390 aa12.27□□□□□ -0.44
NOD1-201ENST00000222823 TTC7AQ9ULT0 858 aaPredicted RBP12.27□□□□□ -0.44
NOD1-201ENST00000222823 RHOBTB3O94955 611 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 RWDD4Q6NW29 188 aaKnown RBP12.27□□□□□ -0.45
NOD1-201ENST00000222823 LRGUKQ96M69 825 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 SH2D3AQ9BRG2 576 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 PITPNM3Q9BZ71 974 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 RPAP3Q9H6T3 665 aaPredicted RBP12.27□□□□□ -0.45
NOD1-201ENST00000222823 DONSONQ9NYP3 566 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 ZNRF3Q9ULT6 936 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 CAMTA1Q9Y6Y1 1673 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 KIF3CO14782 793 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 TTC4O95801 387 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 ELF1P32519 619 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 SARSP49591 514 aaKnown RBP12.27□□□□□ -0.45
NOD1-201ENST00000222823 PSMC1P62191 440 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms