RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Fam129bQ8R1F1 749 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gsg1Q8R1W2 324 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Paip1Q8VE62 400 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Psrc1Q9D0P7 329 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gtf2iQ9ESZ8 998 aaKnown RBP9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Tmod3Q9JHJ0 352 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Sorbs3Q9R1Z8 733 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cdhr2E9Q7P9 1308 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Col16a1Q8BLX7 1580 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Skint7A7XV04 395 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Grik3B1AS29 919 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm6685D3YYP3 228 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm3095E9Q058 166 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mcmdc2E9Q956 681 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 AgxtO35423 414 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Grap2O89100 322 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Man1a1P45700 655 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gbx2P48031 348 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cd300lgQ1ERP8 331 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Q66JV7 365 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Atp1a2Q6PIE5 1020 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Slc9c1Q6UJY2 1175 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 AtcayQ8BHE3 372 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Clba1Q8BHN9 321 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rbbp5Q8BX09 538 aaKnown RBP9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Tmem120aQ8C1E7 343 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Prkd3Q8K1Y2 889 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Yeats4Q9CR11 227 aaKnown RBP9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ifi35Q9D8C4 286 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gdap2Q9DBL2 498 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rgs17Q9QZB0 210 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nrxn1Q9CS84 1514 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 A0A286YCD0 109 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Fnd3c2A2AP83 941 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Slc35g2D3YVE8 412 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nsmce4aG3XA30 381 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Atp2a2O55143 1044 aaKnown RBP9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Alas2P08680 587 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Psmc4P54775 418 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Snrpa1P57784 255 aaKnown RBP9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Pcp4P63054 62 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rtel1Q0VGM9 1203 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zdhhc20Q5Y5T1 380 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 LrmpQ60664 539 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 MarcoQ60754 518 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 QpctlQ8BH73 383 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Fam161bQ8CB59 589 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Flad1Q8R123 492 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 MlxiplQ99MZ3 864 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ms4a6dQ99N07 247 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Txnrd1Q9JMH6 613 aa9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Add1Q9QYC0 735 aaKnown RBP9.82□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Abca15E9PWH4 1668 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cd300ld2A2A7W0 305 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cd300ld4A2A7W1 245 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zfp362B1ASA5 418 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Oog1E9Q5G7 496 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zfp607bG3X9H3 648 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Pik3cdO35904 1043 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Npy5rO70342 466 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 RpsaP14206 295 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 D1Pas1P16381 660 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ercc5P35689 1170 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 RpiaP47968 303 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 CtswP56203 371 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Arpc4P59999 168 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 FerP70451 823 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cab39Q06138 341 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Agbl5Q09M02 886 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 4930502E18RikQ14BQ3 236 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Krt76Q3UV17 594 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Igf2bp2Q5SF07 592 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Runx1t1Q61909 577 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ablim3Q69ZX8 682 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cd300ld3Q6SJQ5 245 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nol11Q8BJW5 723 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Map4k5Q8BPM2 847 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ppp4r4Q8C0Y0 875 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Stbd1Q8C7E7 338 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Agbl3Q8CDP0 1006 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nlrp3Q8R4B8 1033 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Trim59Q922Y2 403 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Atp6v1g1Q9CR51 118 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 B4galt5Q9JMK0 388 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 RhagQ9QUT0 438 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 MeiocA2AG06 965 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zbtb34A2ATY4 518 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm4302E9PX25 294 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Api5O35841 504 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nck2O55033 380 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mtco1P00397 514 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Hspa8P63017 646 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Hdhd2Q3UGR5 259 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Sdf4Q61112 361 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Fxr1Q61584 677 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Otop3Q80UF9 577 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nlrp4aQ8BU40 982 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ano4Q8C5H1 955 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Itm2cQ91VK4 269 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zfp617Q91WM0 559 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms