RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Polr3fQ921X6 316 aa18.23■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 NptxrQ99J85 493 aa18.23■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Slc35g2D3YVE8 412 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Kif3cO35066 796 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 LeprP48356 1162 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Cul4aQ3TCH7 759 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Ugt1a9Q62452 528 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Kcnt1Q6ZPR4 1224 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Leg1Q8C6C9 337 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Usp27Q8CEG8 438 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Epn2Q8CHU3 595 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Q9D2Q3 444 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 IvdQ9JHI5 424 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Lamb2Q61292 1799 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Olfr552E9Q545 317 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Gcnt4E9Q649 455 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Lmnb2P21619 596 aaKnown RBP18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 ProcP33587 460 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 HelqQ2VPA6 1069 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Ttf2Q5NC05 1138 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Pgm5Q8BZF8 567 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Senp2Q91ZX6 588 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Rabl3Q9D4V7 236 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Serpina9Q9D7D2 418 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Kank3Q9Z1P7 791 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Arhgef10lA2AWP8 1280 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Gm2030D3Z7C4 212 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 SpibO35906 267 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 VegfaQ00731 214 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Capn13Q3UW68 665 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Oog4Q4G0C7 502 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 AdalQ80SY6 360 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Slc51bQ80WK2 128 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Slc9a9Q8BZ00 644 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Ces1fQ91WU0 561 aa18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Nup50Q9JIH2 466 aaKnown RBP18.22■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Trim30cD3YVI9 513 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Gm8994E9PV04 411 aaKnown RBP18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Gm44503E9PYU5 387 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Vmn2r15L7N2A0 855 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Bcat1P24288 386 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Kmt5aQ2YDW7 349 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 PnocQ64387 187 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Anks6Q6GQX6 883 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Sdad1Q80UZ2 687 aaKnown RBP18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Vipas39Q8BGQ1 491 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Klhl11Q8CE33 709 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Erlin1Q91X78 346 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Asb11Q9CQ31 323 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Tmx2Q9D710 295 aaKnown RBP18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Col4a3Q9QZS0 1669 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Kcna2P63141 499 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Rnf113a2Q14B01 337 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Kdm7aQ3UWM4 940 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Rnpc3Q3UZ01 514 aaKnown RBP18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Pla2g4cQ64GA5 597 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Nup58Q8R332 587 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 TxlnbQ8VBT1 685 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 MesdQ9ERE7 224 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Sh2b2Q9JID9 621 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Adam22Q9R1V6 904 aa18.21■□□□□ 0.51
Sec61a1-201ENSMUST00000032168 Ccdc24E9PUW8 296 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Per1O35973 1291 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Irf8P23611 424 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Spdye4aQ5IBH6 268 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Sema5bQ60519 1093 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Ift20Q61025 132 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Azin2Q8BVM4 459 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Vmn1r199Q8R280 367 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Fam173bQ9D1Z3 247 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Capn9Q9D805 690 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Olr1Q9EQ09 363 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Sv2aQ9JIS5 742 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Cyp2c68K7N6C2 491 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Ece1Q4PZA2 769 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 PpatQ8CIH9 517 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 AdigQ8R400 80 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Trmt10bQ9D075 318 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 LipeP54310 759 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Tspyl5Q69ZB3 406 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Ddx55Q6ZPL9 600 aaKnown RBP18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Ccdc87Q8CDL9 855 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Mrpl58Q8R035 206 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Bud13Q8R149 637 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Cfap57Q9D180 1249 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Il21rQ9JHX3 529 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Olig1Q9JKN5 260 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Mettl1Q9Z120 268 aa18.2■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Zfp266E9Q2S7 604 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Magea8O89012 320 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Pde1cQ64338 706 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Ssxb10Q6XAR7 170 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Fam177a1Q8BR63 207 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Hsdl1Q8BTX9 330 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Tnpo2Q99LG2 887 aaKnown RBP18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Tsnaxip1Q99P25 704 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Tcirg1Q9JHF5 834 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Vmn2r77L7N2B7 854 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Hoxc10P31257 342 aa18.19■□□□□ 0.5
Sec61a1-201ENSMUST00000032168 Drp2Q05AA6 957 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 95.1 ms