Protein–RNA interactions for Protein: E9Q649

Gcnt4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcnt4E9Q649 Gm25239-201ENSMUST00000174915 86 ntBASIC43.55■■■■■ 4.56
Gcnt4E9Q649 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
Gcnt4E9Q649 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
Gcnt4E9Q649 Gm15042-201ENSMUST00000120212 883 ntBASIC38.06■■■■□ 3.68
Gcnt4E9Q649 Gm24109-201ENSMUST00000175489 103 ntBASIC37.77■■■■□ 3.64
Gcnt4E9Q649 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Gcnt4E9Q649 Gm15045-201ENSMUST00000117359 883 ntBASIC37.28■■■■□ 3.56
Gcnt4E9Q649 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Gcnt4E9Q649 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Gcnt4E9Q649 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.78■■■■□ 3.48
Gcnt4E9Q649 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
Gcnt4E9Q649 Gm23366-201ENSMUST00000175022 89 ntBASIC36.35■■■■□ 3.41
Gcnt4E9Q649 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.24■■■■□ 3.39
Gcnt4E9Q649 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Gcnt4E9Q649 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Gcnt4E9Q649 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Gcnt4E9Q649 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.26■■■■□ 3.23
Gcnt4E9Q649 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.16■■■■□ 3.22
Gcnt4E9Q649 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.15■■■■□ 3.22
Gcnt4E9Q649 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.15■■■■□ 3.22
Gcnt4E9Q649 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Gcnt4E9Q649 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.95■■■■□ 3.19
Gcnt4E9Q649 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
Gcnt4E9Q649 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Gcnt4E9Q649 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.74■■■■□ 3.15
Gcnt4E9Q649 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Gcnt4E9Q649 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.68■■■■□ 3.14
Gcnt4E9Q649 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Gcnt4E9Q649 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.57■■■■□ 3.12
Gcnt4E9Q649 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Gcnt4E9Q649 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Gcnt4E9Q649 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Gcnt4E9Q649 Psd-208ENSMUST00000224556 2034 ntBASIC34.44■■■■□ 3.1
Gcnt4E9Q649 Gm25238-201ENSMUST00000174914 89 ntBASIC34.39■■■■□ 3.1
Gcnt4E9Q649 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.31■■■■□ 3.08
Gcnt4E9Q649 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
Gcnt4E9Q649 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Gcnt4E9Q649 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.89■■■■□ 3.02
Gcnt4E9Q649 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.72■■■□□ 2.99
Gcnt4E9Q649 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Gcnt4E9Q649 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.57■■■□□ 2.96
Gcnt4E9Q649 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Gcnt4E9Q649 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.54■■■□□ 2.96
Gcnt4E9Q649 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Gcnt4E9Q649 Gm27325-201ENSMUST00000175467 74 ntBASIC33.4■■■□□ 2.94
Gcnt4E9Q649 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Gcnt4E9Q649 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Gcnt4E9Q649 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.33■■■□□ 2.93
Gcnt4E9Q649 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
Gcnt4E9Q649 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.26■■■□□ 2.91
Gcnt4E9Q649 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Gcnt4E9Q649 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.11■■■□□ 2.89
Gcnt4E9Q649 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Gcnt4E9Q649 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.01■■■□□ 2.88
Gcnt4E9Q649 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.89■■■□□ 2.86
Gcnt4E9Q649 Gm25262-201ENSMUST00000174934 133 ntBASIC32.88■■■□□ 2.85
Gcnt4E9Q649 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Gcnt4E9Q649 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Gcnt4E9Q649 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Gcnt4E9Q649 Rab21-202ENSMUST00000218831 843 ntBASIC32.75■■■□□ 2.83
Gcnt4E9Q649 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Gcnt4E9Q649 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.64■■■□□ 2.82
Gcnt4E9Q649 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.63■■■□□ 2.81
Gcnt4E9Q649 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Gcnt4E9Q649 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Gcnt4E9Q649 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Gcnt4E9Q649 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Gcnt4E9Q649 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.44■■■□□ 2.78
Gcnt4E9Q649 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Gcnt4E9Q649 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Gcnt4E9Q649 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.39■■■□□ 2.78
Gcnt4E9Q649 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
Gcnt4E9Q649 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Gcnt4E9Q649 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Gcnt4E9Q649 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.35■■■□□ 2.77
Gcnt4E9Q649 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Gcnt4E9Q649 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Gcnt4E9Q649 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
Gcnt4E9Q649 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.28■■■□□ 2.76
Gcnt4E9Q649 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Gcnt4E9Q649 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Gcnt4E9Q649 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Gcnt4E9Q649 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.21■■■□□ 2.75
Gcnt4E9Q649 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Gcnt4E9Q649 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Gcnt4E9Q649 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Gcnt4E9Q649 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Gcnt4E9Q649 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.06■■■□□ 2.72
Gcnt4E9Q649 Gm26115-201ENSMUST00000175605 87 ntBASIC32.03■■■□□ 2.72
Gcnt4E9Q649 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Gcnt4E9Q649 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Gcnt4E9Q649 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.99■■■□□ 2.71
Gcnt4E9Q649 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.98■■■□□ 2.71
Gcnt4E9Q649 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Gcnt4E9Q649 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Gcnt4E9Q649 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Gcnt4E9Q649 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Gcnt4E9Q649 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Gcnt4E9Q649 Gm8109-201ENSMUST00000194076 746 ntBASIC31.88■■■□□ 2.69
Gcnt4E9Q649 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.88■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms