RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Taok1Q5F2E8 1001 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ccdc125Q5U465 500 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Sgsm1Q8BPQ7 1093 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Gga1Q8R0H9 635 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 CrygnQ8VHL5 183 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Setd6Q9CWY3 473 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Snx1Q9WV80 522 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Prpf38aQ4FK66 312 aaKnown RBP18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Luc7l3Q5SUF2 432 aaKnown RBP18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Tdrd5Q5VCS6 1040 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Znf526Q8BI66 675 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Tti1Q91V83 1085 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Mtmr4Q91XS1 1190 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Drap1Q9D6N5 205 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Fam205aA2APU8 1308 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Taf4bG5E8Z2 855 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Nedd1P33215 660 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Trim43bP86448 445 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Garnl3Q3V0G7 1038 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 CpQ61147 1061 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Cpa1Q7TPZ8 419 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 SktA2AQ25 1946 aaKnown RBP18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Slc1a1P51906 523 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Dab2P98078 766 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ripor1Q68FE6 1223 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 SltmQ8CH25 1031 aaKnown RBP18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ints9Q8K114 658 aaKnown RBP18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Isl2Q9CXV0 359 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Nudt12Q9DCN1 462 aa18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Noc2lQ9WV70 747 aaKnown RBP18.12■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ap1b1O35643 943 aaKnown RBP18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Diaph2O70566 1098 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Casp14O89094 257 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Zc3h12cQ5DTV4 884 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 DaglaQ6WQJ1 1044 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Fsd1lQ8BYN5 507 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 SowahcQ8C0J6 512 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Pnpt1Q8K1R3 783 aaKnown RBP18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Spata1Q9D5R4 444 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Rsrc1Q9DBU6 334 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 IqccA2ADZ8 418 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Klhdc7aA2APT9 773 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Akap1O08715 857 aaKnown RBP18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Rps6ka3P18654 740 aaKnown RBP18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Gjc1P28229 396 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Stmn4P63042 189 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Serping1P97290 504 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ect2Q07139 913 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 KizQ3UXL4 695 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Grm6Q5NCH9 871 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Bank1Q80VH0 783 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ift74Q8BKE9 600 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Stat3P42227 770 aaKnown RBP18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Atp13a4Q5XF90 1193 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 SnphQ80U23 495 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 NsmfQ99NF2 532 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Satl1Q9D5N8 744 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ccnt1Q9QWV9 724 aaKnown RBP18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 XdhQ00519 1335 aa18.11■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Sclt1G5E861 688 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Flot1O08917 428 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Sema4dO09126 861 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 PdgfaP20033 211 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Gm10488Q4KL05 212 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Kiaa1211Q5PR69 1207 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 IarsQ8BU30 1262 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Trmt13Q8BYH3 481 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Apol9bQ8C7I4 310 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Apol9aQ8VDU3 310 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Pcdhb4Q91XZ6 784 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ier5lQ99J55 406 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Fthl17aQ9DAX0 182 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Myh14Q6URW6 2000 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Eif3dO70194 548 aaKnown RBP18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 MaeaQ4VC33 396 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Soat1Q61263 540 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Taok3Q8BYC6 898 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Dnajc9Q91WN1 259 aaKnown RBP18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Fkbp6Q91XW8 327 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Rfx8D3YU81 596 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Kif5aP33175 1027 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Meis2P97367 477 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Vav2Q60992 868 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Znf879Q8BI99 563 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Armc6Q8BNU0 468 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Cdan1Q8CC12 1239 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Shtn1Q8K2Q9 631 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 McmbpQ8R3C0 642 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Sgsm3Q8VCZ6 750 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Rin1Q921Q7 763 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 4930519G04RikQ9CPT7 205 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Zbed3Q9D0L1 228 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Slc15a2Q9ES07 729 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Tcirg1Q9JHF5 834 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Usp31E9Q6Y8 1344 aa18.1■□□□□ 0.49
Ctcf-201ENSMUST00000005841 DnttP09838 530 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Gstt2Q61133 244 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Xlr3cQ61806 226 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 N4bp3Q8C7U1 537 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ssh3Q8K330 649 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 71.6 ms