RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 LTV1P34078 463 aa0.13□□□□□ -2.39
snR55snR55 MPE1P35728 441 aaKnown RBP0.13□□□□□ -2.39
snR55snR55 YGR266WP53326 701 aa0.13□□□□□ -2.39
snR55snR55 BIO4P53630 237 aa0.13□□□□□ -2.39
snR55snR55 SMP3Q04174 516 aa0.13□□□□□ -2.39
snR55snR55 AIM33Q04516 312 aa0.13□□□□□ -2.39
snR55snR55 SPO77Q06134 477 aa0.13□□□□□ -2.39
snR55snR55 PFK27Q12471 397 aaPredicted RBP0.13□□□□□ -2.39
snR55snR55 MSK1P32048 576 aa0.12□□□□□ -2.39
snR55snR55 COY1P34237 679 aa0.12□□□□□ -2.39
snR55snR55 YOR062CP36025 268 aa0.12□□□□□ -2.39
snR55snR55 MLH1P38920 769 aa0.12□□□□□ -2.39
snR55snR55 AYR1P40471 297 aa0.12□□□□□ -2.39
snR55snR55 TSR2Q06672 205 aaKnown RBP0.12□□□□□ -2.39
snR55snR55 RRG1Q12167 365 aaPredicted RBP0.12□□□□□ -2.39
snR55snR55 YAL063C-AQ3E791 96 aa0.12□□□□□ -2.39
snR55snR55 MDH1P17505 334 aaKnown RBP RIP-Chip data0.11□□□□□ -2.39not detected
snR55snR55 YCR102CP25608 368 aa0.11□□□□□ -2.39
snR55snR55 SUR1P33300 382 aa0.11□□□□□ -2.39
snR55snR55 BUD2P33314 1104 aa0.11□□□□□ -2.39
snR55snR55 YHR045WP38775 560 aa0.11□□□□□ -2.39
snR55snR55 FYV8P46949 817 aaKnown RBP0.11□□□□□ -2.39
snR55snR55 CAB4P53332 305 aa0.11□□□□□ -2.39
snR55snR55 AIM45Q12480 344 aaKnown RBP0.11□□□□□ -2.39
snR55snR55 YPL247CQ12523 523 aa0.11□□□□□ -2.39
snR55snR55 REP1P03871 373 aa0.1□□□□□ -2.39
snR55snR55 CDC31P06704 161 aaKnown RBP0.1□□□□□ -2.39
snR55snR55 VPS1P21576 704 aaKnown RBP0.1□□□□□ -2.39
snR55snR55 VPH2P32341 215 aa0.1□□□□□ -2.39
snR55snR55 DSE2P38844 325 aa0.1□□□□□ -2.39
snR55snR55 SYS1P41544 203 aa0.1□□□□□ -2.39
snR55snR55 YNR066CP53752 436 aa0.1□□□□□ -2.39
snR55snR55 NUP49Q02199 472 aa0.1□□□□□ -2.39
snR55snR55 BOL1Q3E793 110 aa0.1□□□□□ -2.39
snR55snR55 FSH3Q99369 266 aa0.1□□□□□ -2.39
snR55snR55 UBR2Q07963 1872 aa0.1□□□□□ -2.39
snR55snR55 TDH1P00360 332 aaKnown RBP0.09□□□□□ -2.4
snR55snR55 GRR1P24814 1151 aa0.09□□□□□ -2.4
snR55snR55 RPC53P25441 422 aa0.09□□□□□ -2.4
snR55snR55 PSO2P30620 661 aa0.09□□□□□ -2.4
snR55snR55 KTI12P34253 313 aaKnown RBP0.09□□□□□ -2.4
snR55snR55 PET8P38921 284 aa0.09□□□□□ -2.4
snR55snR55 YER135CP40082 130 aa0.09□□□□□ -2.4
snR55snR55 MRPL49P40858 161 aaPredicted RBP0.09□□□□□ -2.4
snR55snR55 MPS2P53159 387 aa0.09□□□□□ -2.4
snR55snR55 FCF1Q05498 189 aaPredicted RBP0.09□□□□□ -2.4
snR55snR55 YOR268CQ08734 132 aa0.09□□□□□ -2.4
snR55snR55 SRN2Q99176 213 aa0.09□□□□□ -2.4
snR55snR55 RAD10P06838 210 aa0.08□□□□□ -2.4
snR55snR55 SPS100P13130 326 aa0.08□□□□□ -2.4
snR55snR55 PDX1P16451 410 aa0.08□□□□□ -2.4
snR55snR55 FUR1P18562 216 aaKnown RBP0.08□□□□□ -2.4
snR55snR55 ARF2P19146 181 aaKnown RBP0.08□□□□□ -2.4
snR55snR55 CKI1P20485 582 aa0.08□□□□□ -2.4
snR55snR55 UTR1P21373 530 aa0.08□□□□□ -2.4
snR55snR55 ATG15P25641 520 aa0.08□□□□□ -2.4
snR55snR55 ERG9P29704 444 aa0.08□□□□□ -2.4
snR55snR55 AIM29P36154 155 aa0.08□□□□□ -2.4
snR55snR55 UTP25P40498 721 aaKnown RBP0.08□□□□□ -2.4
snR55snR55 RMT2Q03305 412 aa0.08□□□□□ -2.4
snR55snR55 NAT4Q04751 285 aa0.08□□□□□ -2.4
snR55snR55 MRX9Q07349 420 aaKnown RBP0.08□□□□□ -2.4
snR55snR55 YDL121CQ07541 149 aa0.08□□□□□ -2.4
snR55snR55 APC5Q08683 685 aa0.08□□□□□ -2.4
snR55snR55 GPM3Q12326 303 aa0.08□□□□□ -2.4
snR55snR55 PRM4Q12498 284 aa0.08□□□□□ -2.4
snR55snR55 CDC7P06243 507 aa0.07□□□□□ -2.4
snR55snR55 RAD1P06777 1100 aa0.07□□□□□ -2.4
snR55snR55 YDR089WP38966 869 aa0.07□□□□□ -2.4
snR55snR55 COG3P40094 801 aa0.07□□□□□ -2.4
snR55snR55 OST3P48439 350 aa0.07□□□□□ -2.4
snR55snR55 CIK1Q01649 594 aa0.07□□□□□ -2.4
snR55snR55 SEC13Q04491 297 aaKnown RBP0.07□□□□□ -2.4
snR55snR55 YOR292CQ08743 309 aa0.07□□□□□ -2.4
snR55snR55 YPL245WQ12179 454 aaKnown RBP0.07□□□□□ -2.4
snR55snR55 MXR2P25566 168 aa0.06□□□□□ -2.4
snR55snR55 GLE2P40066 365 aa0.06□□□□□ -2.4
snR55snR55 RSM27P53305 110 aa0.06□□□□□ -2.4
snR55snR55 YOL019WQ08157 551 aa0.06□□□□□ -2.4
snR55snR55 PEX27Q08580 376 aa0.06□□□□□ -2.4
snR55snR55 GAL7P08431 366 aa0.05□□□□□ -2.4
snR55snR55 YOL162WP0CF19 215 aa0.05□□□□□ -2.4
snR55snR55 RPL1AP0CX43 217 aaKnown RBP0.05□□□□□ -2.4
snR55snR55 RPL1BP0CX44 217 aaKnown RBP0.05□□□□□ -2.4
snR55snR55 YCR025CP25352 136 aa0.05□□□□□ -2.4
snR55snR55 DOA4P32571 926 aa0.05□□□□□ -2.4
snR55snR55 GPX1P36014 167 aa0.05□□□□□ -2.4
snR55snR55 YER188C-AP0C0V2 99 aa0.04□□□□□ -2.4
snR55snR55 SNL1P40548 159 aa0.04□□□□□ -2.4
snR55snR55 DTD1Q07648 150 aaKnown RBP0.04□□□□□ -2.4
snR55snR55 RDL2Q08742 149 aaKnown RBP0.04□□□□□ -2.4
snR55snR55 SFG1Q12507 346 aa0.04□□□□□ -2.4
snR55snR55 PAN1P32521 1480 aa0.03□□□□□ -2.4
snR55snR55 YKR045CP36138 183 aa0.03□□□□□ -2.4
snR55snR55 IML3P38265 245 aa0.03□□□□□ -2.4
snR55snR55 YIL012WP40551 113 aa0.03□□□□□ -2.4
snR55snR55 YJL016WP47072 561 aa0.03□□□□□ -2.4
snR55snR55 TPN1P53099 579 aa0.03□□□□□ -2.4
snR55snR55 LIF1P53150 421 aa0.03□□□□□ -2.4
snR55snR55 HCH1P53834 153 aa0.03□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms