RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 TIM10P87108 93 aa2.84□□□□□ -1.95
snR42snR42 APM1Q00776 475 aaPredicted RBP2.84□□□□□ -1.95
snR42snR42 YKR011CQ02209 353 aa2.84□□□□□ -1.95
snR42snR42 ACL4Q03771 387 aa2.84□□□□□ -1.95
snR42snR42 SPC24Q04477 213 aa2.84□□□□□ -1.95
snR42snR42 SPC2Q04969 178 aa2.84□□□□□ -1.95
snR42snR42 HRI1Q05905 244 aaKnown RBP2.84□□□□□ -1.95
snR42snR42 GPI11Q06636 219 aa2.84□□□□□ -1.95
snR42snR42 RAF1Q06891 181 aa2.84□□□□□ -1.95
snR42snR42 YDL211CQ12121 372 aa2.84□□□□□ -1.95
snR42snR42 MED2Q12124 431 aa2.84□□□□□ -1.95
snR42snR42 HER1Q12276 1246 aa2.84□□□□□ -1.95
snR42snR42 FOL3Q12676 427 aaPredicted RBP2.84□□□□□ -1.95
snR42snR42 CDC39P25655 2108 aaKnown RBP2.84□□□□□ -1.96
snR42snR42 ATP2P00830 511 aaKnown RBP2.83□□□□□ -1.96
snR42snR42 UGA1P17649 471 aa2.83□□□□□ -1.96
snR42snR42 UTR1P21373 530 aa2.83□□□□□ -1.96
snR42snR42 CMK2P22517 447 aa2.83□□□□□ -1.96
snR42snR42 PRP28P23394 588 aa2.83□□□□□ -1.96
snR42snR42 HSP30P25619 332 aa2.83□□□□□ -1.96
snR42snR42 ITR2P30606 609 aa2.83□□□□□ -1.96
snR42snR42 SNC1P31109 117 aa2.83□□□□□ -1.96
snR42snR42 CHK1P38147 527 aa2.83□□□□□ -1.96
snR42snR42 RPP1P38786 293 aa2.83□□□□□ -1.96
snR42snR42 YHR097CP38809 366 aaKnown RBP2.83□□□□□ -1.96
snR42snR42 CTF8P38877 133 aa2.83□□□□□ -1.96
snR42snR42 YHR218WP38899 603 aa2.83□□□□□ -1.96
snR42snR42 FET3P38993 636 aa2.83□□□□□ -1.96
snR42snR42 RBG1P39729 369 aa2.83□□□□□ -1.96
snR42snR42 MAM33P40513 266 aa2.83□□□□□ -1.96
snR42snR42 HXT9P40885 567 aa2.83□□□□□ -1.96
snR42snR42 IDP2P41939 412 aa2.83□□□□□ -1.96
snR42snR42 MPC1P53157 130 aaKnown RBP2.83□□□□□ -1.96
snR42snR42 YGR168CP53293 376 aa2.83□□□□□ -1.96
snR42snR42 OGG1P53397 376 aaPredicted RBP2.83□□□□□ -1.96
snR42snR42 HXT11P54862 567 aa2.83□□□□□ -1.96
snR42snR42 YMR102CQ03177 834 aa2.83□□□□□ -1.96
snR42snR42 SWA2Q06677 668 aa2.83□□□□□ -1.96
snR42snR42 IRC19Q07843 230 aa2.83□□□□□ -1.96
snR42snR42 NTG2Q08214 380 aa2.83□□□□□ -1.96
snR42snR42 SKI7Q08491 747 aaPredicted RBP2.83□□□□□ -1.96
snR42snR42 RSA1Q08932 381 aa2.83□□□□□ -1.96
snR42snR42 BTS1Q12051 335 aa2.83□□□□□ -1.96
snR42snR42 MCP1Q12106 302 aa2.83□□□□□ -1.96
snR42snR42 YRA1Q12159 226 aaKnown RBP2.83□□□□□ -1.96
snR42snR42 YDL180WQ12301 547 aa2.83□□□□□ -1.96
snR42snR42 MRX4Q12467 430 aa2.83□□□□□ -1.96
snR42snR42 HEM4P06174 275 aa2.82□□□□□ -1.96
snR42snR42 YOL163WP0CF20 169 aa2.82□□□□□ -1.96
snR42snR42 RPL35AP0CX84 120 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 RPL35BP0CX85 120 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 ASF2P32448 525 aaPredicted RBP2.82□□□□□ -1.96
snR42snR42 GSH1P32477 678 aa2.82□□□□□ -1.96
snR42snR42 CYS4P32582 507 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 GPX1P36014 167 aa2.82□□□□□ -1.96
snR42snR42 COS9P36034 407 aa2.82□□□□□ -1.96
snR42snR42 JEN1P36035 616 aa2.82□□□□□ -1.96
snR42snR42 MRPL39P36533 70 aa2.82□□□□□ -1.96
snR42snR42 PRS3P38689 320 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 RPS20P38701 121 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 PTH1P38876 190 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 NAB3P38996 802 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
snR42snR42 KRE29P40026 464 aa2.82□□□□□ -1.96
snR42snR42 LSM4P40070 187 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 YNL195CP40168 261 aa2.82□□□□□ -1.96
snR42snR42 YMR144WP40214 342 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 RFC4P40339 323 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 GPP1P41277 250 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 IRC7P43623 340 aa2.82□□□□□ -1.96
snR42snR42 NOP9P47077 666 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 TMA22P47089 198 aaPredicted RBP2.82□□□□□ -1.96
snR42snR42 ADO1P47143 340 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 MRK1P50873 501 aa2.82□□□□□ -1.96
snR42snR42 DAM1P53267 343 aa2.82□□□□□ -1.96
snR42snR42 YGR126WP53274 230 aa2.82□□□□□ -1.96
snR42snR42 MEP3P53390 489 aa2.82□□□□□ -1.96
snR42snR42 SNF12P53628 566 aa2.82□□□□□ -1.96
snR42snR42 YNR062CP53748 327 aa2.82□□□□□ -1.96
snR42snR42 INN1P53901 409 aa2.82□□□□□ -1.96
snR42snR42 YNL095CP53932 642 aa2.82□□□□□ -1.96
snR42snR42 KAP120Q02932 1032 aa2.82□□□□□ -1.96
snR42snR42 MRP51Q02950 344 aa2.82□□□□□ -1.96
snR42snR42 RRN5Q02983 363 aa2.82□□□□□ -1.96
snR42snR42 RNH202Q05635 350 aa2.82□□□□□ -1.96
snR42snR42 ASA1Q06822 443 aa2.82□□□□□ -1.96
snR42snR42 SNX3Q08826 162 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 RTC5Q12108 567 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 WTM1Q12363 437 aaKnown RBP2.82□□□□□ -1.96
snR42snR42 PFK27Q12471 397 aaPredicted RBP2.82□□□□□ -1.96
snR42snR42 MHF1Q3E835 90 aa2.82□□□□□ -1.96
snR42snR42 YOL087CQ99247 1116 aa2.82□□□□□ -1.96
snR42snR42 BLM10P43583 2143 aa2.81□□□□□ -1.96
snR42snR42 RPL24AP04449 155 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 RHO1P06780 209 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 PEP4P07267 405 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 TFS1P14306 219 aa2.81□□□□□ -1.96
snR42snR42 YPK2P18961 677 aa2.81□□□□□ -1.96
snR42snR42 NUP1P20676 1076 aa2.81□□□□□ -1.96
snR42snR42 REC107P21651 314 aa2.81□□□□□ -1.96
snR42snR42 CLB4P24871 460 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms