RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W YGR035W-AQ45U48 73 aa4.39□□□□□ -1.71
SSO1YPL232W YBL113CQ7M4S9 792 aa4.39□□□□□ -1.71
SSO1YPL232W MF(ALPHA)1P01149 165 aa4.38□□□□□ -1.71
SSO1YPL232W RPL6BP05739 176 aaKnown RBP4.38□□□□□ -1.71
SSO1YPL232W RPS8AP0CX39 200 aaKnown RBP4.38□□□□□ -1.71
SSO1YPL232W RPS8BP0CX40 200 aaKnown RBP4.38□□□□□ -1.71
SSO1YPL232W DBP3P20447 523 aaKnown RBP4.38□□□□□ -1.71
SSO1YPL232W DIT1P21623 536 aa4.38□□□□□ -1.71
SSO1YPL232W SED4P25365 1065 aa4.38□□□□□ -1.71
SSO1YPL232W MDL1P33310 695 aa4.38□□□□□ -1.71
SSO1YPL232W GDI1P39958 451 aaKnown RBP4.38□□□□□ -1.71
SSO1YPL232W PIC2P40035 300 aa4.38□□□□□ -1.71
SSO1YPL232W MET28P40573 187 aa4.38□□□□□ -1.71
SSO1YPL232W SYF2P53277 215 aaPredicted RBP4.38□□□□□ -1.71
SSO1YPL232W SMM1P53720 384 aaKnown RBP4.38□□□□□ -1.71
SSO1YPL232W ARC35P53731 342 aaKnown RBP4.38□□□□□ -1.71
SSO1YPL232W FAR8Q05040 523 aa4.38□□□□□ -1.71
SSO1YPL232W SSK1Q07084 712 aa4.38□□□□□ -1.71
SSO1YPL232W RTN2Q12443 393 aa4.38□□□□□ -1.71
SSO1YPL232W ARG3P05150 338 aa4.37□□□□□ -1.71
SSO1YPL232W YML003WP0CF16 290 aa4.37□□□□□ -1.71
SSO1YPL232W YER190C-BP0CX94 160 aa4.37□□□□□ -1.71
SSO1YPL232W YEL077W-AP0CX95 160 aa4.37□□□□□ -1.71
SSO1YPL232W YGR296C-BP0CX96 160 aa4.37□□□□□ -1.71
SSO1YPL232W YPL283W-BP0CX97 160 aa4.37□□□□□ -1.71
SSO1YPL232W YPR204C-AP0CX98 160 aa4.37□□□□□ -1.71
SSO1YPL232W YFL068WP0CX99 160 aa4.37□□□□□ -1.71
SSO1YPL232W YLL066W-AP0CY00 160 aa4.37□□□□□ -1.71
SSO1YPL232W YLL067W-AP0CY01 160 aa4.37□□□□□ -1.71
SSO1YPL232W ARO3P14843 370 aaKnown RBP4.37□□□□□ -1.71
SSO1YPL232W PRE2P30656 287 aaKnown RBP4.37□□□□□ -1.71
SSO1YPL232W SNC1P31109 117 aa4.37□□□□□ -1.71
SSO1YPL232W ARP2P32381 391 aaKnown RBP4.37□□□□□ -1.71
SSO1YPL232W JEN1P36035 616 aa4.37□□□□□ -1.71
SSO1YPL232W NAB3P38996 802 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SSO1YPL232W AGE2P40529 298 aa4.37□□□□□ -1.71
SSO1YPL232W SGN1P40561 250 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SSO1YPL232W SNM1P40993 198 aa4.37□□□□□ -1.71
SSO1YPL232W TAX4P47030 604 aa4.37□□□□□ -1.71
SSO1YPL232W YDL186WP48568 277 aa4.37□□□□□ -1.71
SSO1YPL232W NUP57P48837 541 aa4.37□□□□□ -1.71
SSO1YPL232W BRR6P53062 197 aa4.37□□□□□ -1.71
SSO1YPL232W MRM2P53123 320 aa4.37□□□□□ -1.71
SSO1YPL232W MPC1P53157 130 aaKnown RBP4.37□□□□□ -1.71
SSO1YPL232W YPL077CQ02831 240 aa4.37□□□□□ -1.71
SSO1YPL232W YPL108WQ02872 168 aaPredicted RBP4.37□□□□□ -1.71
SSO1YPL232W VPS60Q03390 229 aa4.37□□□□□ -1.71
SSO1YPL232W YDR387CQ04162 555 aa4.37□□□□□ -1.71
SSO1YPL232W YDR391CQ04170 232 aa4.37□□□□□ -1.71
SSO1YPL232W CTS2Q06350 511 aa4.37□□□□□ -1.71
SSO1YPL232W YPR127WQ06494 345 aa4.37□□□□□ -1.71
SSO1YPL232W IPK1Q06667 281 aa4.37□□□□□ -1.71
SSO1YPL232W YPR053CQ6Q5F3 151 aa4.37□□□□□ -1.71
SSO1YPL232W YMR085WP0CF18 432 aa4.36□□□□□ -1.71
SSO1YPL232W YAK1P14680 807 aa4.36□□□□□ -1.71
SSO1YPL232W PUP2P32379 260 aa4.36□□□□□ -1.71
SSO1YPL232W GLC7P32598 312 aaKnown RBP4.36□□□□□ -1.71
SSO1YPL232W YKL071WP36086 256 aa4.36□□□□□ -1.71
SSO1YPL232W FIG1P38224 298 aa4.36□□□□□ -1.71
SSO1YPL232W YBR096WP38256 230 aa4.36□□□□□ -1.71
SSO1YPL232W RPP1P38786 293 aa4.36□□□□□ -1.71
SSO1YPL232W YEL068CP39977 110 aa4.36□□□□□ -1.71
SSO1YPL232W BUR6P40096 142 aa4.36□□□□□ -1.71
SSO1YPL232W YGR201CP42936 225 aa4.36□□□□□ -1.71
SSO1YPL232W YGL235WP53071 178 aa4.36□□□□□ -1.71
SSO1YPL232W COX18P53239 316 aa4.36□□□□□ -1.71
SSO1YPL232W KRE28Q04431 385 aa4.36□□□□□ -1.71
SSO1YPL232W SEC13Q04491 297 aaKnown RBP4.36□□□□□ -1.71
SSO1YPL232W SPO77Q06134 477 aa4.36□□□□□ -1.71
SSO1YPL232W ARO10Q06408 635 aa4.36□□□□□ -1.71
SSO1YPL232W PRP11Q07350 266 aaPredicted RBP4.36□□□□□ -1.71
SSO1YPL232W HAP4P14064 554 aa4.35□□□□□ -1.71
SSO1YPL232W CCA1P21269 546 aa4.35□□□□□ -1.71
SSO1YPL232W ELO2P25358 347 aa4.35□□□□□ -1.71
SSO1YPL232W POL4P25615 582 aa4.35□□□□□ -1.71
SSO1YPL232W DEP1P31385 405 aa4.35□□□□□ -1.71
SSO1YPL232W SAC1P32368 623 aaKnown RBP4.35□□□□□ -1.71
SSO1YPL232W ECM15P35195 104 aa4.35□□□□□ -1.71
SSO1YPL232W YHR035WP38769 630 aa4.35□□□□□ -1.71
SSO1YPL232W CTR2P38865 189 aa4.35□□□□□ -1.71
SSO1YPL232W YIL166CP40445 542 aa4.35□□□□□ -1.71
SSO1YPL232W YNR062CP53748 327 aa4.35□□□□□ -1.71
SSO1YPL232W YNR064CP53750 290 aa4.35□□□□□ -1.71
SSO1YPL232W VPS71Q03433 280 aa4.35□□□□□ -1.71
SSO1YPL232W MFG1Q07684 458 aa4.35□□□□□ -1.71
SSO1YPL232W NCA2Q12374 616 aa4.35□□□□□ -1.71
SSO1YPL232W YOL087CQ99247 1116 aa4.35□□□□□ -1.71
SSO1YPL232W TIM9O74700 87 aa4.34□□□□□ -1.71
SSO1YPL232W RPL39P04650 51 aa4.34□□□□□ -1.71
SSO1YPL232W YOL163WP0CF20 169 aa4.34□□□□□ -1.71
SSO1YPL232W YCR051WP25631 222 aa4.34□□□□□ -1.71
SSO1YPL232W PPA2P28239 310 aa4.34□□□□□ -1.71
SSO1YPL232W PAD1P33751 242 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SSO1YPL232W APL3P38065 1025 aa4.34□□□□□ -1.71
SSO1YPL232W GPI18P38211 433 aa4.34□□□□□ -1.71
SSO1YPL232W ALP1P38971 573 aa4.34□□□□□ -1.71
SSO1YPL232W NAS2P40555 220 aa4.34□□□□□ -1.71
SSO1YPL232W GCN20P43535 752 aaKnown RBP4.34□□□□□ -1.71
SSO1YPL232W IRC7P43623 340 aa4.34□□□□□ -1.71
SSO1YPL232W IMD4P50094 524 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms