RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C RBS1Q05672 457 aaKnown RBP3.69□□□□□ -1.82
SNF8YPL002C VIK1Q12045 647 aa3.69□□□□□ -1.82
SNF8YPL002C RBD2Q12270 262 aa3.69□□□□□ -1.82
SNF8YPL002C SPO24Q3E752 67 aa3.69□□□□□ -1.82
SNF8YPL002C DYN1P36022 4092 aa3.69□□□□□ -1.82
SNF8YPL002C FLO9P39712 1322 aa3.69□□□□□ -1.82
SNF8YPL002C TY2A-LR1P0C2J4 438 aa3.68□□□□□ -1.82
SNF8YPL002C RPL20AP0CX23 172 aaKnown RBP3.68□□□□□ -1.82
SNF8YPL002C RPL20BP0CX24 172 aaPredicted RBP3.68□□□□□ -1.82
SNF8YPL002C TY2A-FP0CX61 438 aa3.68□□□□□ -1.82
SNF8YPL002C TY2A-GR2P0CX62 438 aa3.68□□□□□ -1.82
SNF8YPL002C FUS3P16892 353 aaKnown RBP3.68□□□□□ -1.82
SNF8YPL002C CBF1P17106 351 aa3.68□□□□□ -1.82
SNF8YPL002C SEC14P24280 304 aaKnown RBP3.68□□□□□ -1.82
SNF8YPL002C SLM5P25345 492 aaKnown RBP3.68□□□□□ -1.82
SNF8YPL002C TY2A-CP25383 438 aa3.68□□□□□ -1.82
SNF8YPL002C STP22P25604 385 aa3.68□□□□□ -1.82
SNF8YPL002C ATS1P31386 333 aa3.68□□□□□ -1.82
SNF8YPL002C SIP1P32578 815 aa3.68□□□□□ -1.82
SNF8YPL002C MSN4P33749 630 aa3.68□□□□□ -1.82
SNF8YPL002C TPO5P36029 618 aa3.68□□□□□ -1.82
SNF8YPL002C SDS22P36047 338 aa3.68□□□□□ -1.82
SNF8YPL002C YKR015CP36111 568 aa3.68□□□□□ -1.82
SNF8YPL002C ATP3P38077 311 aaKnown RBP3.68□□□□□ -1.82
SNF8YPL002C SNX4P47057 423 aa3.68□□□□□ -1.82
SNF8YPL002C VMA10P48836 114 aaKnown RBP3.68□□□□□ -1.82
SNF8YPL002C BUD32P53323 261 aa3.68□□□□□ -1.82
SNF8YPL002C TY2A-DR2Q03483 438 aa3.68□□□□□ -1.82
SNF8YPL002C SWF1Q04629 336 aa3.68□□□□□ -1.82
SNF8YPL002C YMR317WQ04893 1140 aa3.68□□□□□ -1.82
SNF8YPL002C RTT103Q05543 409 aa3.68□□□□□ -1.82
SNF8YPL002C YPR091CQ06833 770 aa3.68□□□□□ -1.82
SNF8YPL002C YOR365CQ08844 703 aa3.68□□□□□ -1.82
SNF8YPL002C NCE102Q12207 173 aaRIP-Chip data3.68□□□□□ -1.82not detected
SNF8YPL002C TY2A-BQ12260 438 aa3.68□□□□□ -1.82
SNF8YPL002C TY2A-OR2Q12293 438 aa3.68□□□□□ -1.82
SNF8YPL002C TY2A-DR1Q12392 438 aa3.68□□□□□ -1.82
SNF8YPL002C TY2A-OR1Q12439 438 aa3.68□□□□□ -1.82
SNF8YPL002C TY2A-DR3Q99303 438 aa3.68□□□□□ -1.82
SNF8YPL002C YHR214C-DP0CX93 97 aa3.67□□□□□ -1.82
SNF8YPL002C ARF1P11076 181 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C CBS2P14905 389 aa3.67□□□□□ -1.82
SNF8YPL002C RPI1P23250 407 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C YCR016WP25617 290 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C YCR090CP25654 182 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C GCG1P32656 232 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C GDH2P33327 1092 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C DOA1P36037 715 aa3.67□□□□□ -1.82
SNF8YPL002C AUR1P36107 401 aaPredicted RBP3.67□□□□□ -1.82
SNF8YPL002C NTC20P38302 140 aaPredicted RBP3.67□□□□□ -1.82
SNF8YPL002C PRS3P38689 320 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C TRR2P38816 342 aa3.67□□□□□ -1.82
SNF8YPL002C SUR2P38992 349 aa3.67□□□□□ -1.82
SNF8YPL002C YND1P40009 630 aa3.67□□□□□ -1.82
SNF8YPL002C APT1P49435 187 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C IBD2P53892 351 aa3.67□□□□□ -1.82
SNF8YPL002C EAF7P53911 425 aaKnown RBP3.67□□□□□ -1.82
SNF8YPL002C RMI1Q02685 241 aa3.67□□□□□ -1.82
SNF8YPL002C GIP3Q03016 1276 aa3.67□□□□□ -1.82
SNF8YPL002C DCR2Q05924 578 aa3.67□□□□□ -1.82
SNF8YPL002C RIF2Q06208 395 aa3.67□□□□□ -1.82
SNF8YPL002C BCP1Q06338 283 aa3.67□□□□□ -1.82
SNF8YPL002C ATG17Q06410 417 aa3.67□□□□□ -1.82
SNF8YPL002C YLL007CQ07799 665 aa3.67□□□□□ -1.82
SNF8YPL002C RDR1Q08904 546 aa3.67□□□□□ -1.82
SNF8YPL002C YDL211CQ12121 372 aa3.67□□□□□ -1.82
SNF8YPL002C GET4Q12125 312 aa3.67□□□□□ -1.82
SNF8YPL002C PSY3Q12318 242 aa3.67□□□□□ -1.82
SNF8YPL002C MED4Q12343 284 aa3.67□□□□□ -1.82
SNF8YPL002C YMR030W-AQ3E760 96 aa3.67□□□□□ -1.82
SNF8YPL002C YCL012CQ8J0M4 134 aa3.67□□□□□ -1.82
SNF8YPL002C RGS2Q99188 309 aa3.67□□□□□ -1.82
SNF8YPL002C SPT3P06844 337 aa3.66□□□□□ -1.82
SNF8YPL002C CAR2P07991 424 aaKnown RBP3.66□□□□□ -1.82
SNF8YPL002C ERD1P16151 362 aa3.66□□□□□ -1.82
SNF8YPL002C IDH2P28241 369 aaKnown RBP3.66□□□□□ -1.82
SNF8YPL002C DAD2P36162 133 aa3.66□□□□□ -1.82
SNF8YPL002C FES1P38260 290 aa3.66□□□□□ -1.82
SNF8YPL002C YMR262WP38430 313 aa3.66□□□□□ -1.82
SNF8YPL002C YGP1P38616 354 aaKnown RBP3.66□□□□□ -1.82
SNF8YPL002C AGE2P40529 298 aa3.66□□□□□ -1.82
SNF8YPL002C LOH1P47055 219 aa3.66□□□□□ -1.82
SNF8YPL002C LSG1P53145 640 aaKnown RBP3.66□□□□□ -1.82
SNF8YPL002C URH1Q04179 340 aa3.66□□□□□ -1.82
SNF8YPL002C GMC2Q06201 188 aa3.66□□□□□ -1.82
SNF8YPL002C FMP40Q08968 688 aaPredicted RBP3.66□□□□□ -1.82
SNF8YPL002C YLR112WQ12130 139 aa3.66□□□□□ -1.82
SNF8YPL002C GEP5Q12393 293 aa3.66□□□□□ -1.82
SNF8YPL002C MHT1Q12525 324 aa3.66□□□□□ -1.82
SNF8YPL002C YMR230W-AQ3E7B5 62 aa3.66□□□□□ -1.82
SNF8YPL002C CBP6P07253 162 aaPredicted RBP3.65□□□□□ -1.83
SNF8YPL002C PRB1P09232 635 aa3.65□□□□□ -1.83
SNF8YPL002C ADH4P10127 382 aa3.65□□□□□ -1.83
SNF8YPL002C GAL3P13045 520 aa3.65□□□□□ -1.83
SNF8YPL002C GCY1P14065 312 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
SNF8YPL002C NOP1P15646 327 aaKnown RBP3.65□□□□□ -1.83
SNF8YPL002C ART10P18634 518 aaKnown RBP3.65□□□□□ -1.83
SNF8YPL002C OLE1P21147 510 aaKnown RBP3.65□□□□□ -1.83
SNF8YPL002C PHO91P27514 894 aa3.65□□□□□ -1.83
SNF8YPL002C YEF1P32622 495 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms