RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	FMP32	P43557	207 aa		4.26	□□□□□ -1.73
PCL1	YNL289W	TRS85	P46944	698 aa		4.26	□□□□□ -1.73
PCL1	YNL289W	PMT4	P46971	762 aa		4.26	□□□□□ -1.73
PCL1	YNL289W	MRM2	P53123	320 aa		4.26	□□□□□ -1.73
PCL1	YNL289W	NOP19	P53317	196 aa	Predicted RBP	4.26	□□□□□ -1.73
PCL1	YNL289W	CUS2	P53830	285 aa	Predicted RBP	4.26	□□□□□ -1.73
PCL1	YNL289W	SED5	Q01590	340 aa		4.26	□□□□□ -1.73
PCL1	YNL289W	IRC15	Q02733	499 aa		4.26	□□□□□ -1.73
PCL1	YNL289W	YDR124W	Q04608	324 aa		4.26	□□□□□ -1.73
PCL1	YNL289W	JLP1	Q12358	412 aa		4.26	□□□□□ -1.73
PCL1	YNL289W	CBS1	P14066	229 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	DBR1	P24309	405 aa	Known RBP	4.25	□□□□□ -1.73
PCL1	YNL289W	PUT3	P25502	979 aa	Predicted RBP	4.25	□□□□□ -1.73
PCL1	YNL289W	TAH1	P25638	111 aa	Predicted RBP	4.25	□□□□□ -1.73
PCL1	YNL289W	SIN4	P32259	974 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	SEC17	P32602	292 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	RPS27A	P35997	82 aa	Known RBP	4.25	□□□□□ -1.73
PCL1	YNL289W	CAF4	P36130	643 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	RPS27B	P38711	82 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	PRM10	P42946	383 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	STE24	P47154	453 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	TAF6	P53040	516 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	GPI1	P53306	609 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	YNL140C	P53910	189 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	FIN1	Q03898	291 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	APC4	Q04601	652 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	RRN11	Q04712	507 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	RBS1	Q05672	457 aa	Known RBP	4.25	□□□□□ -1.73
PCL1	YNL289W	BOP2	Q06150	570 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	VPS74	Q06385	345 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	REX4	Q08237	289 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	YCL021W-A	Q96VH3	125 aa		4.25	□□□□□ -1.73
PCL1	YNL289W	MEC1	P38111	2368 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	COR1	P07256	457 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	RAD14	P28519	371 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	SPO23	P33757	523 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	YCR087C-A	P37263	153 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	ASC1	P38011	319 aa	Known RBP	4.24	□□□□□ -1.73
PCL1	YNL289W	SRO77	P38163	1010 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	RFC3	P38629	340 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	GWT1	P47026	490 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	RAD17	P48581	401 aa		4.24	□□□□□ -1.73
PCL1	YNL289W	RQC1	Q05468	723 aa	Known RBP	4.24	□□□□□ -1.73
PCL1	YNL289W	CBP2	P03874	630 aa	Predicted RBP	4.23	□□□□□ -1.73
PCL1	YNL289W	GLK1	P17709	500 aa	Known RBP	4.23	□□□□□ -1.73
PCL1	YNL289W	SLM5	P25345	492 aa	Known RBP	4.23	□□□□□ -1.73
PCL1	YNL289W	MRPL15	P36523	253 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	STP2	P38704	541 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	HPM1	P40481	377 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	YPI1	P43587	155 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	NAS6	P50086	228 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	SDT1	P53078	280 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	CDH1	P53197	566 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	YGR066C	P53242	292 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	RBG2	P53295	368 aa	Known RBP	4.23	□□□□□ -1.73
PCL1	YNL289W	PRP38	Q00723	242 aa	Predicted RBP	4.23	□□□□□ -1.73
PCL1	YNL289W	YMR010W	Q03687	405 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	FMN1	Q03778	218 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	YHC1	Q05900	231 aa	Known RBP	4.23	□□□□□ -1.73
PCL1	YNL289W	YPL278C	Q08990	100 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	SNF8	Q12483	233 aa		4.23	□□□□□ -1.73
PCL1	YNL289W	MES1	P00958	751 aa	Known RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	RAS2	P01120	322 aa	Known RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	GCD2	P12754	651 aa	Predicted RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	UNG1	P12887	359 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	PMR1	P13586	950 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	EXO70	P19658	623 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	CCA1	P21269	546 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	SPB1	P25582	841 aa	Predicted RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	FAA1	P30624	700 aa	Known RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	GDT1	P38301	280 aa	Predicted RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	MBB1	P39534	108 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	UTP25	P40498	721 aa	Known RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	HOC1	P47124	396 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	GTO1	P48239	356 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	USE1	P53146	245 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	MSO1	P53604	210 aa	Known RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	SUB1	P54000	292 aa	Known RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	PRO2	P54885	456 aa	Known RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	OAZ1	Q02803	292 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	PEX25	Q02969	394 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	SGT1	Q08446	395 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	HNT3	Q08702	217 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	RPN5	Q12250	445 aa	Known RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	ATG34	Q12292	412 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	BRR1	Q99177	341 aa	Predicted RBP	4.22	□□□□□ -1.73
PCL1	YNL289W	SAS5	Q99314	248 aa		4.22	□□□□□ -1.73
PCL1	YNL289W	ARG3	P05150	338 aa		4.21	□□□□□ -1.74
PCL1	YNL289W	URA4	P20051	364 aa		4.21	□□□□□ -1.74
PCL1	YNL289W	SPS22	P25380	463 aa		4.21	□□□□□ -1.74
PCL1	YNL289W	NIP1	P32497	812 aa	Known RBP	4.21	□□□□□ -1.74
PCL1	YNL289W	VPS21	P36017	210 aa	Known RBP	4.21	□□□□□ -1.74
PCL1	YNL289W	CAB3	P36076	571 aa		4.21	□□□□□ -1.74
PCL1	YNL289W	AIM2	P39721	246 aa		4.21	□□□□□ -1.74
PCL1	YNL289W	AYR1	P40471	297 aa		4.21	□□□□□ -1.74
PCL1	YNL289W	TMA22	P47089	198 aa	Predicted RBP	4.21	□□□□□ -1.74
PCL1	YNL289W	ECM11	Q04110	302 aa		4.21	□□□□□ -1.74
PCL1	YNL289W	YER078W-A	Q3E7A2	54 aa		4.21	□□□□□ -1.74
PCL1	YNL289W	YPR096C	O13587	100 aa		4.2	□□□□□ -1.74
PCL1	YNL289W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms