RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W YCR007CP25354 239 aa2.2□□□□□ -2.06
HRD3YLR207W SWD2P36104 329 aaPredicted RBP2.2□□□□□ -2.06
HRD3YLR207W PRM9P39551 298 aa2.2□□□□□ -2.06
HRD3YLR207W RBG1P39729 369 aa2.2□□□□□ -2.06
HRD3YLR207W SHO1P40073 367 aa2.2□□□□□ -2.06
HRD3YLR207W YER189WP40104 122 aa2.2□□□□□ -2.06
HRD3YLR207W TAF6P53040 516 aa2.2□□□□□ -2.06
HRD3YLR207W HOP2P53187 214 aa2.2□□□□□ -2.06
HRD3YLR207W SNZ1Q03148 297 aa2.2□□□□□ -2.06
HRD3YLR207W MZM1Q03429 123 aaPredicted RBP2.2□□□□□ -2.06
HRD3YLR207W HER2Q03557 464 aa2.2□□□□□ -2.06
HRD3YLR207W YMR209CQ03648 457 aa2.2□□□□□ -2.06
HRD3YLR207W SKI7Q08491 747 aaPredicted RBP2.2□□□□□ -2.06
HRD3YLR207W MUM3Q08750 479 aa2.2□□□□□ -2.06
HRD3YLR207W ORT1Q12375 292 aa2.2□□□□□ -2.06
HRD3YLR207W BI3Q9ZZW7 517 aa2.2□□□□□ -2.06
HRD3YLR207W JIP3O13555 125 aa2.2□□□□□ -2.06
HRD3YLR207W TDH2P00358 332 aaKnown RBP2.2□□□□□ -2.06
HRD3YLR207W RPL24BP24000 155 aaKnown RBP2.2□□□□□ -2.06
HRD3YLR207W RBK1P25332 333 aa2.2□□□□□ -2.06
HRD3YLR207W YCP4P25349 247 aaKnown RBP2.2□□□□□ -2.06
HRD3YLR207W ITR2P30606 609 aa2.2□□□□□ -2.06
HRD3YLR207W MRPS5P33759 307 aa2.2□□□□□ -2.06
HRD3YLR207W SKT5P34226 696 aa2.2□□□□□ -2.06
HRD3YLR207W FRE2P36033 711 aa2.2□□□□□ -2.06
HRD3YLR207W YKL162CP36052 402 aa2.2□□□□□ -2.06
HRD3YLR207W ECM4P36156 370 aa2.2□□□□□ -2.06
HRD3YLR207W BIG1P38813 335 aa2.2□□□□□ -2.06
HRD3YLR207W YHR182WP38870 785 aa2.2□□□□□ -2.06
HRD3YLR207W FAA2P39518 744 aa2.2□□□□□ -2.06
HRD3YLR207W PSA1P41940 361 aaKnown RBP2.2□□□□□ -2.06
HRD3YLR207W YJR054WP47114 497 aa2.2□□□□□ -2.06
HRD3YLR207W NAS6P50086 228 aa2.2□□□□□ -2.06
HRD3YLR207W SEH1P53011 349 aaKnown RBP2.2□□□□□ -2.06
HRD3YLR207W PXR1P53335 271 aaPredicted RBP2.2□□□□□ -2.06
HRD3YLR207W TDA7P53882 636 aaPredicted RBP2.2□□□□□ -2.06
HRD3YLR207W ESBP6P53918 673 aa2.2□□□□□ -2.06
HRD3YLR207W SAM50P53969 484 aa2.2□□□□□ -2.06
HRD3YLR207W SLT2Q00772 484 aa2.2□□□□□ -2.06
HRD3YLR207W ADH6Q04894 360 aaKnown RBP2.2□□□□□ -2.06
HRD3YLR207W BER1Q06688 274 aaKnown RBP2.2□□□□□ -2.06
HRD3YLR207W SGT1Q08446 395 aa2.2□□□□□ -2.06
HRD3YLR207W GPM2Q12008 311 aa2.2□□□□□ -2.06
HRD3YLR207W ATX2Q12067 313 aa2.2□□□□□ -2.06
HRD3YLR207W GET4Q12125 312 aa2.2□□□□□ -2.06
HRD3YLR207W SET6Q12529 373 aa2.2□□□□□ -2.06
HRD3YLR207W MATALPHA1P0CY06 175 aa2.19□□□□□ -2.06
HRD3YLR207W HMLALPHA1P0CY07 175 aa2.19□□□□□ -2.06
HRD3YLR207W LSB5P25369 354 aa2.19□□□□□ -2.06
HRD3YLR207W YCR100CP25606 316 aa2.19□□□□□ -2.06
HRD3YLR207W ACB1P31787 87 aa2.19□□□□□ -2.06
HRD3YLR207W ZUO1P32527 433 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W GCG1P32656 232 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W YKL097CP34245 136 aa2.19□□□□□ -2.06
HRD3YLR207W MED6P38782 295 aa2.19□□□□□ -2.06
HRD3YLR207W YIL054WP40524 105 aa2.19□□□□□ -2.06
HRD3YLR207W YFL040WP43562 540 aa2.19□□□□□ -2.06
HRD3YLR207W IRC15Q02733 499 aa2.19□□□□□ -2.06
HRD3YLR207W ARO80Q04052 950 aa2.19□□□□□ -2.06
HRD3YLR207W YDR222WQ04925 415 aa2.19□□□□□ -2.06
HRD3YLR207W TAF9Q05027 157 aa2.19□□□□□ -2.06
HRD3YLR207W MRPL51Q06090 140 aaPredicted RBP2.19□□□□□ -2.06
HRD3YLR207W VPS74Q06385 345 aa2.19□□□□□ -2.06
HRD3YLR207W THI20Q08224 551 aa2.19□□□□□ -2.06
HRD3YLR207W RAX1Q08760 435 aa2.19□□□□□ -2.06
HRD3YLR207W NCA2Q12374 616 aa2.19□□□□□ -2.06
HRD3YLR207W YOP1Q12402 180 aa2.19□□□□□ -2.06
HRD3YLR207W ATG31Q12421 196 aa2.19□□□□□ -2.06
HRD3YLR207W FKS1P38631 1876 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W YLR462WO13556 202 aa2.19□□□□□ -2.06
HRD3YLR207W TEF1P02994 458 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W MET16P18408 261 aaPredicted RBP2.19□□□□□ -2.06
HRD3YLR207W RPS2P25443 254 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W SEC1P30619 724 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W TRS65P32893 560 aa2.19□□□□□ -2.06
HRD3YLR207W TKL2P33315 681 aa2.19□□□□□ -2.06
HRD3YLR207W AIM29P36154 155 aa2.19□□□□□ -2.06
HRD3YLR207W LDB7P38210 180 aa2.19□□□□□ -2.06
HRD3YLR207W YHL049CP38722 271 aa2.19□□□□□ -2.06
HRD3YLR207W GEP4P38812 185 aa2.19□□□□□ -2.06
HRD3YLR207W ATG7P38862 630 aa2.19□□□□□ -2.06
HRD3YLR207W YHB1P39676 399 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W XBP1P40489 647 aa2.19□□□□□ -2.06
HRD3YLR207W YFL064CP43540 174 aa2.19□□□□□ -2.06
HRD3YLR207W GUF1P46943 645 aa2.19□□□□□ -2.06
HRD3YLR207W EFM5P53200 248 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W TIM13P53299 105 aa2.19□□□□□ -2.06
HRD3YLR207W TRM112P53738 135 aaPredicted RBP2.19□□□□□ -2.06
HRD3YLR207W SED5Q01590 340 aa2.19□□□□□ -2.06
HRD3YLR207W ENT5Q03769 411 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W YMR226CQ05016 267 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W YLR283WQ05867 314 aa2.19□□□□□ -2.06
HRD3YLR207W YEH2Q07950 538 aa2.19□□□□□ -2.06
HRD3YLR207W YRA1Q12159 226 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W YBL111CQ3E7Y5 667 aa2.19□□□□□ -2.06
HRD3YLR207W MEX67Q99257 599 aaKnown RBP2.19□□□□□ -2.06
HRD3YLR207W COX2P00410 251 aa2.18□□□□□ -2.06
HRD3YLR207W RAD10P06838 210 aa2.18□□□□□ -2.06
HRD3YLR207W ZRC1P20107 442 aa2.18□□□□□ -2.06
HRD3YLR207W UTR1P21373 530 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms